RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 RALGPS1Q5JS13 557 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 CBWD3Q5JTY5 395 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 RABGAP1LQ5R372 815 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 CBWD5Q5RIA9 395 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 SLC7A5P1Q8MH63 180 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 TMIGD2Q96BF3 282 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 NEURL2Q9BR09 285 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 HEMGNQ9BXL5 484 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 TRPC7Q9HCX4 862 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 ALDH18A1P54886 795 aaKnown RBP19.56■□□□□ 0.72
PTPA-223ENST00000452489 CD300CQ08708 224 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 BORAQ6PGQ7 559 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 TTC17Q96AE7 1141 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 ERLEC1Q96DZ1 483 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 DCUN1D1Q96GG9 259 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 C17orf75Q9HAS0 396 aa19.56■□□□□ 0.72
PTPA-223ENST00000452489 TUBA8Q9NY65 449 aaPredicted RBP19.56■□□□□ 0.72
PTPA-223ENST00000452489 C10orf71Q711Q0 1435 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 ARAP2Q8WZ64 1704 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 CALUO43852 315 aaPredicted RBP19.55■□□□□ 0.72
PTPA-223ENST00000452489 BANF1O75531 89 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 TNFAIP8O95379 198 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 STAMBPO95630 424 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 SRGAP2CP0DJJ0 459 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 SRGAP2BP0DMP2 458 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 CPOXP36551 454 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 RPL26P61254 145 aaKnown RBP19.55■□□□□ 0.72
PTPA-223ENST00000452489 CYP4A11Q02928 519 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 UBAP2LQ14157 1087 aaKnown RBP19.55■□□□□ 0.72
PTPA-223ENST00000452489 SPIDRQ14159 915 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 NOP9Q86U38 636 aaKnown RBP19.55■□□□□ 0.72
PTPA-223ENST00000452489 PCDHB18PQ96TA0 734 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 DCP1AQ9NPI6 582 aaPredicted RBP19.55■□□□□ 0.72
PTPA-223ENST00000452489 PLK2Q9NYY3 685 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 PIK3CDO00329 1044 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 ITM2AO43736 263 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 CRTAMO95727 393 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 FUCA1P04066 466 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 RFC4P35249 363 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 ARHGAP4P98171 946 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 ANKS1BQ7Z6G8 1248 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 EFCAB3Q8N7B9 438 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 TEKT1Q969V4 418 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 CSRNP1Q96S65 589 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 EIF2AQ9BY44 585 aaKnown RBP19.55■□□□□ 0.72
PTPA-223ENST00000452489 ZNF696Q9H7X3 374 aa19.55■□□□□ 0.72
PTPA-223ENST00000452489 TRMT112Q9UI30 125 aaKnown RBP19.55■□□□□ 0.72
PTPA-223ENST00000452489 MYPNQ86TC9 1320 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 TRPA1O75762 1119 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 KIF6Q6ZMV9 814 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 HAS1Q92839 578 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 OSBPL6Q9BZF3 934 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 INTS2Q9H0H0 1204 aaKnown RBP19.54■□□□□ 0.72
PTPA-223ENST00000452489 UVRAGQ9P2Y5 699 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 PDXKO00764 312 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 TRIM49P0CI25 452 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 TRIM49CP0CI26 452 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 THRAP10827 490 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 FMO5P49326 533 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 BCAP31P51572 246 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 NR1H2P55055 460 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 AHI1Q8N157 1196 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 BANPQ8N9N5 519 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 SCAIQ8N9R8 606 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 GLIS1Q8NBF1 620 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 RNF169Q8NCN4 708 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 TRNAU1APQ9NX07 287 aaKnown RBP19.54■□□□□ 0.72
PTPA-223ENST00000452489 THEGQ9P2T0 379 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 APEX2Q9UBZ4 518 aa19.54■□□□□ 0.72
PTPA-223ENST00000452489 SPATA31A1Q5TZJ5 1347 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 RSPH10B2B2RC85 870 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 RSPH10BP0C881 870 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 HOXD11P31277 338 aaPredicted RBP19.53■□□□□ 0.72
PTPA-223ENST00000452489 CIITAP33076 1130 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 MAN1A1P33908 653 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 PHKA2P46019 1235 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 ALDH1A3P47895 512 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 TCEAL1Q15170 157 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 SYCP2LQ5T4T6 812 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 ANO5Q75V66 913 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 SEPT12Q8IYM1 358 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 LZTR1Q8N653 840 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 CCDC89Q8N998 374 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 MORC4Q8TE76 937 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 CLIP3Q96DZ5 547 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 FAM111AQ96PZ2 611 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 SLC38A7Q9NVC3 462 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.72
PTPA-223ENST00000452489 UTP6Q9NYH9 597 aaKnown RBP19.53■□□□□ 0.72
PTPA-223ENST00000452489 AP4B1Q9Y6B7 739 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 H3BNX3 289 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 CASQ2O14958 399 aaPredicted RBP19.53■□□□□ 0.72
PTPA-223ENST00000452489 POLR2MP0CAP2 368 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 OCM2P0CE71 109 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 OCMP0CE72 109 aaPredicted RBP19.53■□□□□ 0.72
PTPA-223ENST00000452489 ORC2Q13416 577 aaPredicted RBP19.53■□□□□ 0.72
PTPA-223ENST00000452489 CNGA3Q16281 694 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 ZNF423Q2M1K9 1284 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 DHRS4L2Q6PKH6 230 aa19.53■□□□□ 0.72
PTPA-223ENST00000452489 ANKMY2Q8IV38 441 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms