RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
USP1-204ENST00000452143 EXOC7Q9UPT5 735 aa11.74□□□□□ -0.53
USP1-204ENST00000452143 PCDHB5Q9Y5E4 795 aa11.74□□□□□ -0.53
USP1-204ENST00000452143 USP24Q9UPU5 2620 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 CCDC163A0A0D9SF12 145 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 SLC30A4O14863 429 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 SNPHO15079 494 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 HRO43593 1189 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 CSH1P0DML2 217 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 CSH2P0DML3 217 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 GAP43P17677 238 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 ADSSP30520 456 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 TXLNAP40222 546 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 NLRP12P59046 1061 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 AMPD2Q01433 879 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 EML5Q05BV3 1969 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 TNK2Q07912 1038 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 DMWDQ09019 674 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 BFSP1Q12934 665 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 ALCAMQ13740 583 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 CRELD2Q6UXH1 353 aaPredicted RBP11.73□□□□□ -0.53
USP1-204ENST00000452143 PRR23CQ6ZRP0 262 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 LRRTM3Q86VH5 581 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 WDR5BQ86VZ2 330 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 BRSK2Q8IWQ3 736 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 FAM83CQ9BQN1 747 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 STRA6Q9BX79 667 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 SLC46A2Q9BY10 475 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 ANAPC1Q9H1A4 1944 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 MRPL44Q9H9J2 332 aaKnown RBP11.73□□□□□ -0.53
USP1-204ENST00000452143 ABCB6Q9NP58 842 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 OLFML3Q9NRN5 406 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 MYO16Q9Y6X6 1858 aa11.73□□□□□ -0.53
USP1-204ENST00000452143 PTPRDP23468 1912 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 ATG13O75143 517 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 LDHAP00338 332 aaKnown RBP11.72□□□□□ -0.53
USP1-204ENST00000452143 F11P03951 625 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 HMGA1P17096 107 aaKnown RBP11.72□□□□□ -0.53
USP1-204ENST00000452143 PDCP20941 246 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 GARTP22102 1010 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 GRSF1Q12849 480 aaKnown RBP eCLIP11.72□□□□□ -0.53
USP1-204ENST00000452143 ZNF268Q14587 947 aaPredicted RBP11.72□□□□□ -0.53
USP1-204ENST00000452143 TMEM196Q5HYL7 178 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 L1TD1Q5T7N2 865 aaKnown RBP11.72□□□□□ -0.53
USP1-204ENST00000452143 TMEM150AQ86TG1 271 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 GPIHBP1Q8IV16 184 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 TMEM86AQ8N2M4 240 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 LRRC52Q8N7C0 313 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 TTC8Q8TAM2 541 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 GIPC2Q8TF65 315 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 MRPS31Q92665 395 aaKnown RBP11.72□□□□□ -0.53
USP1-204ENST00000452143 EXOC4Q96A65 974 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 TRMT2BQ96GJ1 504 aaKnown RBP11.72□□□□□ -0.53
USP1-204ENST00000452143 ACBD6Q9BR61 282 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 SMG9Q9H0W8 520 aaKnown RBP11.72□□□□□ -0.53
USP1-204ENST00000452143 TDP1Q9NUW8 608 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 RBAKQ9NYW8 714 aaPredicted RBP11.72□□□□□ -0.53
USP1-204ENST00000452143 UXTQ9UBK9 157 aaPredicted RBP11.72□□□□□ -0.53
USP1-204ENST00000452143 ITGA11Q9UKX5 1188 aa11.72□□□□□ -0.53
USP1-204ENST00000452143 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.72□□□□□ -0.53
USP1-204ENST00000452143 TRDMT1O14717 391 aaKnown RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 NOL4O94818 638 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 GCNT3O95395 438 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 ITGB3P05106 788 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 ADRB1P08588 477 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 POLR2BP30876 1174 aaKnown RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 RPL10AP62906 217 aaKnown RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 TFAMQ00059 246 aaKnown RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 MYL7Q01449 175 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 SRSF5Q13243 272 aaKnown RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 RUNX3Q13761 415 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 PDGFRLQ15198 375 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 CFAP221Q4G0U5 840 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 HEATR6Q6AI08 1181 aaKnown RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 CEP68Q76N32 757 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 DYMQ7RTS9 669 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 MON1AQ86VX9 555 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 FAM160A2Q8N612 972 aaPredicted RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 MAB21L3Q8N8X9 362 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 C1orf127Q8N9H9 656 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 CACTINQ8WUQ7 758 aaKnown RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 GAB3Q8WWW8 586 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 DDX1Q92499 740 aaKnown RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 USP13Q92995 863 aaPredicted RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 DNAJC19Q96DA6 116 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 EPSTI1Q96J88 318 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 LOXL4Q96JB6 756 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 MYRFLQ96LU7 910 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 ACCSQ96QU6 501 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 FAM213AQ9BRX8 229 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 HPS4Q9NQG7 708 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 GKN1Q9NS71 199 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 C2orf42Q9NWW7 574 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 GDAP2Q9NXN4 497 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 FBXO2Q9UK22 296 aaPredicted RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 CCL26Q9Y258 94 aa11.71□□□□□ -0.53
USP1-204ENST00000452143 SRPRBQ9Y5M8 271 aaKnown RBP11.71□□□□□ -0.53
USP1-204ENST00000452143 MORC2Q9Y6X9 1032 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms