RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 STK38Q15208 465 aa17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 NFE2Q16621 373 aaPredicted RBP17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SDHAF4Q5VUM1 108 aa17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 RALGPS2Q86X27 583 aaPredicted RBP17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CCDC65Q8IXS2 484 aa17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CMTM8Q8IZV2 173 aa17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SPEM1Q8N4L4 309 aa17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CELF5Q8N6W0 485 aaKnown RBP17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 MAB21L3Q8N8X9 362 aa17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 STKLD1Q8NE28 680 aa17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TMEM206Q9H813 350 aa17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 GKN1Q9NS71 199 aa17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 THG1LQ9NWX6 298 aaKnown RBP17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DDX43Q9NXZ2 648 aaKnown RBP17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TFIP11Q9UBB9 837 aaKnown RBP17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 MORC2Q9Y6X9 1032 aaPredicted RBP17.83■□□□□ 0.44
RAB11FIP3-204ENST00000449879 FRYLO94915 3013 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 F11P03951 625 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 HMGA1P17096 107 aaKnown RBP17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 AVPR1AP37288 418 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 NASPP49321 788 aaPredicted RBP17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 NLRP12P59046 1061 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 RBP5P82980 135 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 PLCB2Q00722 1185 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 PKP1Q13835 747 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 PUM1Q14671 1186 aaKnown RBP eCLIP17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 PON2Q15165 354 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 LPAL2Q16609 132 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 WDR44Q5JSH3 913 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 LMBRD2Q68DH5 695 aaPredicted RBP17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DGLUCYQ7Z3D6 616 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TMEM150AQ86TG1 271 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 GPD1LQ8N335 351 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 LRRC52Q8N7C0 313 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 HPS3Q969F9 1004 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ACBD6Q9BR61 282 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 GTF3C4Q9UKN8 822 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ITGA11Q9UKX5 1188 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SNX9Q9Y5X1 595 aa17.82■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ZNF638Q14966 1978 aaKnown RBP17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TMEM191BP0C7N4 346 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CSH1P0DML2 217 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CSH2P0DML3 217 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CYP2F1P24903 491 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 MYL7Q01449 175 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DDR2Q16832 855 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 RSPO4Q2I0M5 234 aaPredicted RBP17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ITPRIPL2Q3MIP1 535 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DGKKQ5KSL6 1271 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TXNDC8Q6A555 127 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 Q6ZS52 159 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TMEM86AQ8N2M4 240 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 GPR161Q8N6U8 529 aaKnown RBP17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 LINC00301Q8NCQ3 95 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 GLIS3Q8NEA6 775 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CXorf38Q8TB03 319 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 MTMR12Q9C0I1 747 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SIX4Q9UIU6 781 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ZMYM5Q9UJ78 669 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 RAB23Q9ULC3 237 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CCL26Q9Y258 94 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 R3HCC1Q9Y3T6 440 aaKnown RBP17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 NUP210Q8TEM1 1887 aaPredicted RBP17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DMXL1Q9Y485 3027 aa17.81■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CACNA1AO00555 2505 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CHURC1-FNTBB4DL54 471 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SPTLC2O15270 562 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 FNTBP49356 437 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 RPL10AP62906 217 aaKnown RBP17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 INTS6LQ5JSJ4 861 aaKnown RBP17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 PRR23BQ6ZRT6 265 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 STXBP4Q6ZWJ1 553 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 OSTM1Q86WC4 334 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 MRPS31Q92665 395 aaKnown RBP17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 USP13Q92995 863 aaPredicted RBP17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ANKRD36BP1Q96IX9 119 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 LRRC27Q9C0I9 530 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 GDAP2Q9NXN4 497 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 GMEB2Q9UKD1 530 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SDK1Q7Z5N4 2213 aa17.8■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ATG2BQ96BY7 2078 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ZNF233A6NK53 670 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 KIAA0391O15091 583 aaKnown RBP17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 HCRTO43612 131 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 YEATS4O95619 227 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 LHX1P48742 406 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DMWDQ09019 674 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CCDC142Q17RM4 750 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SOWAHAQ2M3V2 549 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 HEATR6Q6AI08 1181 aaKnown RBP17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 CBWD2Q8IUF1 395 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 SPATA2LQ8IUW3 424 aaPredicted RBP17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 ADGRF2Q8IZF7 708 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TOP6BLQ8N6T0 577 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 OR5B17Q8NGF7 314 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 LEO1Q8WVC0 666 aaPredicted RBP17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 DHX58Q96C10 678 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 FAM83CQ9BQN1 747 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 TNMDQ9H2S6 317 aa17.79■□□□□ 0.44
RAB11FIP3-204ENST00000449879 EBF3Q9H4W6 596 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms