RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 CACNG4Q9UBN1 327 aa10.26□□□□□ -0.77
RFC4-210ENST00000449502 SALL4Q9UJQ4 1053 aa10.26□□□□□ -0.77
RFC4-210ENST00000449502 CDC23Q9UJX2 597 aa10.26□□□□□ -0.77
RFC4-210ENST00000449502 TSPAN16Q9UKR8 245 aa10.26□□□□□ -0.77
RFC4-210ENST00000449502 CDH9Q9ULB4 789 aa10.26□□□□□ -0.77
RFC4-210ENST00000449502 STXBP5LQ9Y2K9 1186 aa10.26□□□□□ -0.77
RFC4-210ENST00000449502 PRG3Q9Y2Y8 225 aaPredicted RBP10.26□□□□□ -0.77
RFC4-210ENST00000449502 KAT6AQ92794 2004 aa10.26□□□□□ -0.77
RFC4-210ENST00000449502 EVPLQ92817 2033 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 KIAA0355O15063 1070 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 ATMINO43313 823 aaPredicted RBP10.25□□□□□ -0.77
RFC4-210ENST00000449502 BUB1BO60566 1050 aaPredicted RBP10.25□□□□□ -0.77
RFC4-210ENST00000449502 UPP2O95045 317 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 CFHP08603 1231 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 PTPN1P18031 435 aaKnown RBP10.25□□□□□ -0.77
RFC4-210ENST00000449502 CDH5P33151 784 aaPredicted RBP10.25□□□□□ -0.77
RFC4-210ENST00000449502 BRCC3P46736 316 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 BCAT1P54687 386 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 HADHBP55084 474 aaKnown RBP10.25□□□□□ -0.77
RFC4-210ENST00000449502 PSMC1P62191 440 aaKnown RBP10.25□□□□□ -0.77
RFC4-210ENST00000449502 TSPY1Q01534 308 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 TIGD5Q53EQ6 642 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 SPOUT1Q5T280 376 aaKnown RBP10.25□□□□□ -0.77
RFC4-210ENST00000449502 PAPD7Q5XG87 772 aaKnown RBP10.25□□□□□ -0.77
RFC4-210ENST00000449502 C11orf63Q6NUN7 778 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 OSTM1Q86WC4 334 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 LRRC43Q8N309 656 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 UBL4BQ8N7F7 174 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 C12orf29Q8N999 325 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 B3GALNT2Q8NCR0 500 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.25□□□□□ -0.77
RFC4-210ENST00000449502 FEZF2Q8TBJ5 459 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 HASPINQ8TF76 798 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 KBTBD7Q8WVZ9 684 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 CASD1Q96PB1 797 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 SYT15Q9BQS2 421 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 ZSWIM1Q9BR11 485 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 TMEM175Q9BSA9 504 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 DPEP3Q9H4B8 488 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 ANAPC7Q9UJX3 599 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 SNX12Q9UMY4 172 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 PCDHB8Q9UN66 801 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 FAN1Q9Y2M0 1017 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 TIMM13Q9Y5L4 95 aaPredicted RBP10.25□□□□□ -0.77
RFC4-210ENST00000449502 MRFAP1Q9Y605 127 aa10.25□□□□□ -0.77
RFC4-210ENST00000449502 GOLGA8SH3BPF8 625 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 TMEM189-UBE2V1I3L0A0 370 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 I3L4J1 428 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 CAPN15O75808 1086 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 MTA2O94776 668 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 DDHD2O94830 711 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 CCDC130P13994 396 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 PRLRP16471 622 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 TYMPP19971 482 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 ACAT1P24752 427 aaKnown RBP10.24□□□□□ -0.77
RFC4-210ENST00000449502 LMO2P25791 158 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 SLC1A1P43005 524 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 SSR1P43307 286 aaKnown RBP10.24□□□□□ -0.77
RFC4-210ENST00000449502 ACADSBP45954 432 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 AARSP49588 968 aaKnown RBP eCLIP10.24□□□□□ -0.77
RFC4-210ENST00000449502 DSC1Q08554 894 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 BST2Q10589 180 aaKnown RBP10.24□□□□□ -0.77
RFC4-210ENST00000449502 ELAVL2Q12926 359 aaKnown RBP10.24□□□□□ -0.77
RFC4-210ENST00000449502 PDCLQ13371 301 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 PPIGQ13427 754 aaKnown RBP eCLIP10.24□□□□□ -0.773e-7■■□□□ 11.7
RFC4-210ENST00000449502 ZNF268Q14587 947 aaPredicted RBP10.24□□□□□ -0.77
RFC4-210ENST00000449502 MAPRE1Q15691 268 aaKnown RBP10.24□□□□□ -0.77
RFC4-210ENST00000449502 ODF2Q5BJF6 829 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 MDH1BQ5I0G3 518 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 PPP1R26Q5T8A7 1209 aaPredicted RBP10.24□□□□□ -0.77
RFC4-210ENST00000449502 MEI1Q5TIA1 1274 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 OVOS1Q6IE37 1185 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 OR6B2Q6IFH4 312 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 MFSD5Q6N075 450 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 LIMS2Q7Z4I7 341 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 ZNF280BQ86YH2 543 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 COLGALT2Q8IYK4 626 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 ANKRD52Q8NB46 1076 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 SLC2A14Q8TDB8 520 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 SUSD3Q96L08 255 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 CARD6Q9BX69 1037 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 L2HGDHQ9H9P8 463 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 CHORDC1Q9UHD1 332 aaPredicted RBP10.24□□□□□ -0.77
RFC4-210ENST00000449502 IP6K2Q9UHH9 426 aa10.24□□□□□ -0.77
RFC4-210ENST00000449502 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.24□□□□□ -0.77
RFC4-210ENST00000449502 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.23□□□□□ -0.77
RFC4-210ENST00000449502 CTAGE15A4D2H0 777 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 CARNS1A5YM72 827 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 TRIM43BA6NCK2 446 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 MIF4GDA9UHW6 222 aaKnown RBP10.23□□□□□ -0.77
RFC4-210ENST00000449502 M0QZQ0 153 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 KCNK3O14649 394 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 GABRDO14764 452 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 NCK2O43639 380 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 CYP11A1P05108 521 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 FAM200BP0CF97 657 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 CTAGE8P0CG41 777 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 KRT3P12035 628 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 CSF2RAP15509 400 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 EN2P19622 333 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms