RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 FOXP3Q9BZS1 431 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 EBF2Q9HAK2 575 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 CISHQ9NSE2 258 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 EURLQ9NYK6 297 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 TJP2Q9UDY2 1190 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 hCG_1818297A0A087WSY0 165 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 A0A0B4J269 797 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 SKAP2O75563 359 aaPredicted RBP13.57□□□□□ -0.24
SHC1-210ENST00000448116 KRT19P08727 400 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 DPEP1P16444 411 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 NRLP54845 237 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 MORF4L2Q15014 288 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 CIAPIN1Q6FI81 312 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 ASRGL1Q7L266 308 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 THNSL1Q8IYQ7 743 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 EMC1Q8N766 993 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 PORCNQ9H237 461 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 ZNFX1Q9P2E3 1918 aaKnown RBP13.57□□□□□ -0.24
SHC1-210ENST00000448116 ALOX15BO15296 676 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 TPD52L2O43399 206 aaKnown RBP13.57□□□□□ -0.24
SHC1-210ENST00000448116 OATP04181 439 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 ADRA1DP25100 572 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 RFC1P35251 1148 aaPredicted RBP13.57□□□□□ -0.24
SHC1-210ENST00000448116 GDF10P55107 478 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 CLDN10P78369 228 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 BASP1P80723 227 aaKnown RBP13.57□□□□□ -0.24
SHC1-210ENST00000448116 C1QTNF12Q5T7M4 302 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 NAIF1Q69YI7 327 aaPredicted RBP13.57□□□□□ -0.24
SHC1-210ENST00000448116 XRRA1Q6P2D8 792 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 TFAP2BQ92481 460 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 ITFG2Q969R8 447 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 CDHR1Q96JP9 859 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 TEPSINQ96N21 525 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 FAM167BQ9BTA0 163 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 UBN1Q9NPG3 1134 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 GINM1Q9NU53 330 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 PSMC3IPQ9P2W1 217 aaPredicted RBP13.57□□□□□ -0.24
SHC1-210ENST00000448116 SMG5Q9UPR3 1016 aaKnown RBP13.57□□□□□ -0.24
SHC1-210ENST00000448116 STARD13Q9Y3M8 1113 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 LOXHD1Q8IVV2 1947 aa13.57□□□□□ -0.24
SHC1-210ENST00000448116 STAM2O75886 525 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 MARK3P27448 753 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 NAMPTP43490 491 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 BACE1P56817 501 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 MCCD1P59942 119 aaPredicted RBP13.56□□□□□ -0.24
SHC1-210ENST00000448116 CNTN2Q02246 1040 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 TNFAIP1Q13829 316 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 TMEM132BQ14DG7 1078 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 RNASEH2BQ5TBB1 312 aaKnown RBP13.56□□□□□ -0.24
SHC1-210ENST00000448116 TRIM68Q6AZZ1 485 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 RELL1Q8IUW5 271 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 DENND1AQ8TEH3 1009 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 MIEF2Q96C03 454 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 ATP2A2P16615 1042 aaKnown RBP13.56□□□□□ -0.24
SHC1-210ENST00000448116 CDKN2BP42772 138 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 HIRAP54198 1017 aaPredicted RBP13.56□□□□□ -0.24
SHC1-210ENST00000448116 MAP3K10Q02779 954 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 MSS51Q4VC12 460 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 FNBP1LQ5T0N5 605 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 LONP2Q86WA8 852 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 ZNF75CPQ92670 426 aaPredicted RBP13.56□□□□□ -0.24
SHC1-210ENST00000448116 UTP4Q969X6 686 aaKnown RBP13.56□□□□□ -0.24
SHC1-210ENST00000448116 WRNIP1Q96S55 665 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 CYP39A1Q9NYL5 469 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 CNTNAP2Q9UHC6 1331 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 EDF1O60869 148 aaKnown RBP13.56□□□□□ -0.24
SHC1-210ENST00000448116 GPX6P59796 221 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 PDK4Q16654 411 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 OTOAQ7RTW8 1153 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 JOSD2Q8TAC2 188 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 JDP2Q8WYK2 163 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 HSPH1Q92598 858 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 CALN1Q9BXU9 219 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 GJA3Q9Y6H8 435 aa13.56□□□□□ -0.24
SHC1-210ENST00000448116 A0A0G2JND7 137 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 KRT3P12035 628 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 EPHB2P29323 1055 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 RAP1GAPP47736 663 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 ARL4CP56559 192 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 GEMIN4P57678 1058 aaKnown RBP13.55□□□□□ -0.24
SHC1-210ENST00000448116 TGFB2P61812 414 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 MCL1Q07820 350 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 OASLQ15646 514 aaKnown RBP13.55□□□□□ -0.24
SHC1-210ENST00000448116 TAF1BQ53T94 588 aaPredicted RBP13.55□□□□□ -0.24
SHC1-210ENST00000448116 RFX6Q8HWS3 928 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 FBXO36Q8NEA4 188 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 PCDH9Q9HC56 1237 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 DCTN3O75935 186 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 ASS1P00966 412 aaKnown RBP13.55□□□□□ -0.24
SHC1-210ENST00000448116 CD48P09326 243 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 FGFR1P11362 822 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 ALADP13716 330 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 PAX7P23759 505 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 PSMC1P62191 440 aaKnown RBP13.55□□□□□ -0.24
SHC1-210ENST00000448116 ACVR2BQ13705 512 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 CAPSQ13938 189 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 PIGHQ14442 188 aaPredicted RBP13.55□□□□□ -0.24
SHC1-210ENST00000448116 FYB2Q5VWT5 728 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 DENND1BQ6P3S1 775 aa13.55□□□□□ -0.24
SHC1-210ENST00000448116 MTDHQ86UE4 582 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms