RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PIGHQ14442 188 aaPredicted RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 TRIP13Q15645 432 aaPredicted RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 CNGA2Q16280 664 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 CYP1B1Q16678 543 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 SKIDA1Q1XH10 827 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 KCTD16Q68DU8 428 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 TWF2Q6IBS0 349 aaKnown RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 ANKS1BQ7Z6G8 1248 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 ACOT1Q86TX2 421 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 KATNAL2Q8IYT4 538 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 IQCKQ8N0W5 287 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 EMC1Q8N766 993 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 OR6B3Q8NGW1 331 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 OR2W6PQ8NHA6 318 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 JOSD2Q8TAC2 188 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAXDC2Q96IV6 333 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 OSBPL8Q9BZF1 889 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 CENPHQ9H3R5 247 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 LRRC19Q9H756 370 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 METTL5Q9NRN9 209 aaKnown RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 GOLGA6AQ9NYA3 693 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 PLAAQ9Y263 795 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 ATP8A1Q9Y2Q0 1164 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 CA12O43570 354 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 DUSP11O75319 330 aaKnown RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 KRT1P04264 644 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 MAN1A1P33908 653 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 CETN2P41208 172 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 FLT3LGP49771 235 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 NFX1Q12986 1120 aaKnown RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 TRIM32Q13049 653 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 PCBP1Q15365 356 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 PPP1R15BQ5SWA1 713 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 MFSD14CQ5VZR4 134 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 TXNRD3NBQ6F5E7 133 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 MREGQ8N565 214 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 MAIP1Q8WWC4 291 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 TRIB2Q92519 343 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 ARL8AQ96BM9 186 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 TSPYL1Q9H0U9 437 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZWILCHQ9H900 591 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAM49BQ9NUQ9 324 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 TSPAN16Q9UKR8 245 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 R3HDM2Q9Y2K5 976 aaKnown RBP10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 DERAQ9Y315 318 aa10.06□□□□□ -0.8
COL6A4P1-201ENST00000446690 PASKQ96RG2 1323 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 SMIM28A0A1B0GU29 152 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 SIGLEC16A6NMB1 481 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 GOLGA8KD6RF30 607 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 HMGCRP04035 888 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 IBSPP21815 317 aaPredicted RBP10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 AXLP30530 894 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 GPD2P43304 727 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 FNTAP49354 379 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 KRT17Q04695 432 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 PDCLQ13371 301 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZBTB6Q15916 424 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 SMTNL2Q2TAL5 461 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 NBPF20Q3BBV1 942 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 DNAJC21Q5F1R6 531 aaKnown RBP10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 CEP85LQ5SZL2 805 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 C9orf57Q5W0N0 161 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 CYP4F22Q6NT55 531 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 XYLT1Q86Y38 959 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 RCOR2Q8IZ40 523 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 NME8Q8N427 588 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 EXD1Q8NHP7 514 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 FBXO25Q8TCJ0 367 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 RUNDC3BQ96NL0 473 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 LPIN3Q9BQK8 851 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 MTG1Q9BT17 334 aaPredicted RBP10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 SPC25Q9HBM1 224 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 GOLGA2P5Q9HBQ8 144 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 ASIC3Q9UHC3 531 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 DOCK3Q8IZD9 2030 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 M0QZ92 97 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 PDGFRBP09619 1106 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 CTSHP09668 335 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 TM4SF4P48230 202 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 VPS41P49754 854 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 RGS7P49802 495 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 INCA1Q0VD86 236 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 UAP1Q16222 522 aaPredicted RBP10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 GOLGA7BQ2TAP0 167 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 KCNT1Q5JUK3 1230 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 PPP1R26Q5T8A7 1209 aaPredicted RBP10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 FAM102AQ5T9C2 384 aaPredicted RBP10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 OR6B2Q6IFH4 312 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 ALKAL1Q6UXT8 129 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 TMC3Q7Z5M5 1100 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 C12orf50Q8NA57 414 aaPredicted RBP10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 EXOC4Q96A65 974 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 SH3GL2Q99962 352 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 DCLK3Q9C098 648 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 ZDHHC18Q9NUE0 388 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 PCSK1NQ9UHG2 260 aa10.05□□□□□ -0.8
COL6A4P1-201ENST00000446690 FEZ2Q9UHY8 353 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms