RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 EPOPA6NHQ4 379 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 ADAM12O43184 909 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 VDRP11473 427 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 CYP11B1P15538 503 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 GNA15P30679 374 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 KLHL30Q0D2K2 578 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 CAMK1Q14012 370 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 SMC1AQ14683 1233 aaKnown RBP18.51■□□□□ 0.55
SGCE-206ENST00000445866 SLC39A12Q504Y0 691 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 SGO2Q562F6 1265 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 FAM171BQ6P995 826 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 MYCBPAPQ8TBZ2 947 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 CYFIP2Q96F07 1278 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 RXFP1Q9HBX9 757 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 CRTAC1Q9NQ79 661 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 THAP12O43422 761 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 CPB1P15086 417 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 BRD2P25440 801 aaKnown RBP18.5■□□□□ 0.55
SGCE-206ENST00000445866 IRS1P35568 1242 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 GSDMDP57764 484 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 CREMQ03060 361 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 ARID5BQ14865 1188 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 E4F1Q66K89 784 aaPredicted RBP18.5■□□□□ 0.55
SGCE-206ENST00000445866 PDE12Q6L8Q7 609 aaKnown RBP18.5■□□□□ 0.55
SGCE-206ENST00000445866 GDPD5Q8WTR4 605 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 ZNF606Q8WXB4 792 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 TFAP2BQ92481 460 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 PDLIM2Q96JY6 352 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 EMILIN2Q9BXX0 1053 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 FAM49BQ9NUQ9 324 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 FNIP2Q9P278 1114 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 PCDHGC5Q9Y5F6 944 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 HIDE1A8MVS5 230 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 TEX28O15482 410 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 PTMAP06454 111 aaKnown RBP18.5■□□□□ 0.55
SGCE-206ENST00000445866 CNPP09543 421 aaKnown RBP18.5■□□□□ 0.55
SGCE-206ENST00000445866 HNRNPH3P31942 346 aaKnown RBP18.5■□□□□ 0.55
SGCE-206ENST00000445866 PDE6CP51160 858 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 CYP27A1Q02318 531 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 MAPRE1Q15691 268 aaKnown RBP18.5■□□□□ 0.55
SGCE-206ENST00000445866 CNGA2Q16280 664 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 CCDC142Q17RM4 750 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 TAF3Q5VWG9 929 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 SLC8B1Q6J4K2 584 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 PANX2Q96RD6 677 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 MED10Q9BTT4 135 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 PDCL3Q9H2J4 239 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 HAUS4Q9H6D7 363 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 TMLHEQ9NVH6 421 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 IRAK3Q9Y616 596 aa18.5■□□□□ 0.55
SGCE-206ENST00000445866 BZW2Q9Y6E2 419 aaKnown RBP18.5■□□□□ 0.55
SGCE-206ENST00000445866 C2orf71A6NGG8 1288 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 FSCN2O14926 492 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 MED7O43513 233 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 SERPING1P05155 500 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 CCDC130P13994 396 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 KLRC2P26717 231 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 SSTR3P32745 418 aaPredicted RBP18.49■□□□□ 0.55
SGCE-206ENST00000445866 GPR17Q13304 367 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 NFE2Q16621 373 aaPredicted RBP18.49■□□□□ 0.55
SGCE-206ENST00000445866 PPP1R26Q5T8A7 1209 aaPredicted RBP18.49■□□□□ 0.55
SGCE-206ENST00000445866 WDR59Q6PJI9 974 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 NOP9Q86U38 636 aaKnown RBP18.49■□□□□ 0.55
SGCE-206ENST00000445866 PALB2Q86YC2 1186 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 SPATA2LQ8IUW3 424 aaPredicted RBP18.49■□□□□ 0.55
SGCE-206ENST00000445866 SLC2A14Q8TDB8 520 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 PCED1BQ96HM7 432 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 KLHL5Q96PQ7 755 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 B3GNT5Q9BYG0 378 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 LMAN2LQ9H0V9 348 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 CHD9Q3L8U1 2897 aa18.49■□□□□ 0.55
SGCE-206ENST00000445866 CLDN5O00501 218 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 SOX1O00570 391 aaPredicted RBP18.48■□□□□ 0.55
SGCE-206ENST00000445866 CCDC173Q0VFZ6 552 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 RAB33AQ14088 237 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 PTPROQ16827 1216 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 TDRD12Q587J7 1177 aaKnown RBP18.48■□□□□ 0.55
SGCE-206ENST00000445866 RNF19BQ6ZMZ0 732 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 C4orf50Q6ZRC1 276 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 EPS8L1Q8TE68 723 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 SLC20A1Q8WUM9 679 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 PGLYRP2Q96PD5 576 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 PKMYT1Q99640 499 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 HNRNPABQ99729 332 aaKnown RBP18.48■□□□□ 0.55
SGCE-206ENST00000445866 ZSWIM1Q9BR11 485 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 RALGAPA2Q2PPJ7 1873 aa18.48■□□□□ 0.55
SGCE-206ENST00000445866 ADORA2BP29275 332 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 PRKCIP41743 596 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 NDUFV1P49821 464 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 ROR1Q01973 937 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 SMARCB1Q12824 385 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 STILQ15468 1287 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 HGSNATQ68CP4 663 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 ZNF677Q86XU0 584 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 ATAD1Q8NBU5 361 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 ZNF461Q8TAF7 563 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 DDX1Q92499 740 aaKnown RBP18.47■□□□□ 0.55
SGCE-206ENST00000445866 MYLPFQ96A32 169 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 AGPAT1Q99943 283 aa18.47■□□□□ 0.55
SGCE-206ENST00000445866 PCDHB5Q9Y5E4 795 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms