RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 ZNF252P-AS1Q0IIN9 211 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 CFAP58Q5T655 872 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 CYP4A22Q5TCH4 519 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 TTC27Q6P3X3 843 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 SYDE1Q6ZW31 735 aaPredicted RBP19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 UNC93AQ86WB7 457 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 ZNF560Q96MR9 790 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 ZIC5Q96T25 663 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 SH3GL2Q99962 352 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 DNAI2Q9GZS0 605 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 SYNCQ9H7C4 482 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 DDX56Q9NY93 547 aaKnown RBP19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 FEZ2Q9UHY8 353 aaPredicted RBP19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 HES2Q9Y543 173 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 TRPV2Q9Y5S1 764 aa19.94■□□□□ 0.78
SEMA3D-202ENST00000444867 KRT3P12035 628 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 GPD2P43304 727 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 COPS2P61201 443 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 ORC1Q13415 861 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 MTMR3Q13615 1198 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 SPDYCQ5MJ68 293 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 XYLT1Q86Y38 959 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 CCDC50Q8IVM0 306 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 CCDC105Q8IYK2 499 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 IQCKQ8N0W5 287 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 IPO4Q8TEX9 1081 aaKnown RBP19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 CPXM1Q96SM3 734 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 ARHGAP39Q9C0H5 1083 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 DPH5Q9H2P9 285 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 SNX9Q9Y5X1 595 aa19.93■□□□□ 0.78
SEMA3D-202ENST00000444867 SMIM28A0A1B0GU29 152 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 PIRO00625 290 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 SETSIPP0DME0 302 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 SSR1P43307 286 aaKnown RBP19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 PDCLQ13371 301 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 NBPF20Q3BBV1 942 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 POLNQ7Z5Q5 900 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 RPAINQ86UA6 219 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 FAM228AQ86W67 206 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 REM2Q8IYK8 340 aaPredicted RBP19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 GRK7Q8WTQ7 553 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 C18orf25Q96B23 403 aaPredicted RBP19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 MCRS1Q96EZ8 462 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 APOL6Q9BWW8 343 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 OSBPL8Q9BZF1 889 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 NEUROG2Q9H2A3 272 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 CXCL16Q9H2A7 254 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 FAN1Q9Y2M0 1017 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 IPPQ9Y573 584 aa19.92■□□□□ 0.78
SEMA3D-202ENST00000444867 GOLGA8KD6RF30 607 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 RNF40O75150 1001 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 ECEL1O95672 775 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 AKAP5P24588 427 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 PTPN7P35236 360 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 OGDHQ02218 1023 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 NOGQ13253 232 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 KLF1Q13351 362 aaPredicted RBP19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 ACAP1Q15027 740 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 DEFB115Q30KQ5 88 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 CYP4F22Q6NT55 531 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 SESTD1Q86VW0 696 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 PKNOX2Q96KN3 472 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 GDAP2Q9NXN4 497 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 VPS18Q9P253 973 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 GOLGA8SH3BPF8 625 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 PPEF2O14830 753 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 ERBB2P04626 1255 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 RALAP11233 206 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 PSMA2P25787 234 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 GLRA4Q5JXX5 417 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 FBXO47Q5MNV8 452 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 CXCL17Q6UXB2 119 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 LRIG3Q6UXM1 1119 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 SMG8Q8ND04 991 aaKnown RBP19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 ZIM3Q96PE6 472 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 FMO2Q99518 471 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 MRPL45Q9BRJ2 306 aaKnown RBP19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 DCLK3Q9C098 648 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 CHST12Q9NRB3 414 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 ZDHHC18Q9NUE0 388 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 TSPAN16Q9UKR8 245 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 CDY2AQ9Y6F7 541 aa19.91■□□□□ 0.78
SEMA3D-202ENST00000444867 F8VP50 259 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 ADAMTS4O75173 837 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 CAPN15O75808 1086 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 PGK1P00558 417 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 RFC1P35251 1148 aaPredicted RBP19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 SNX16P57768 344 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 PRKCZQ05513 592 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 NFX1Q12986 1120 aaKnown RBP19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 CCNG2Q16589 344 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 HADHQ16836 314 aaKnown RBP19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 SV2CQ496J9 727 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 DAB2IPQ5VWQ8 1189 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 TWF2Q6IBS0 349 aaKnown RBP19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 GDF6Q6KF10 455 aaPredicted RBP19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 SERINC5Q86VE9 423 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 HACE1Q8IYU2 909 aa19.9■□□□□ 0.78
SEMA3D-202ENST00000444867 EXOC4Q96A65 974 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 286.4 ms