RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 HMBSP08397 361 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 NCAM1P13591 858 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 HOXD10P28358 340 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 WDR49Q8IV35 697 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 RIBC1Q8N443 379 aaPredicted RBP23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 ZBTB45Q96K62 511 aaPredicted RBP23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 FAM129AQ9BZQ8 928 aa23.43■■□□□ 1.34
CTDSPL-206ENST00000443503 ERVK-9P63128 1117 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 LRRC34Q8IZ02 419 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 MCOLN2Q8IZK6 566 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 SEMA4AQ9H3S1 761 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 CACYBPQ9HB71 228 aaKnown RBP23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 GPATCH2LQ9NWQ4 482 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 NFAT5O94916 1531 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 E2F8A0AVK6 867 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 PLSCR1O15162 318 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 FAM200BP0CF97 657 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 HSPA8P11142 646 aaKnown RBP23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 MDH1BQ5I0G3 518 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 PDE2AO00408 941 aaPredicted RBP23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 RAD23BP54727 409 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 ALDH18A1P54886 795 aaKnown RBP23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 PPP3CAQ08209 521 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 NT5DC3Q86UY8 548 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 ATPAF2Q8N5M1 289 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 CPB2Q96IY4 423 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 TMEM121Q9BTD3 319 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 WDR18Q9BV38 432 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 TMBIM4Q9HC24 238 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 KCND1Q9NSA2 647 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 SLC8A2Q9UPR5 921 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 IFT172Q9UG01 1749 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 TADA2AO75478 443 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 TGFB3P10600 412 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 SERPINB9P50453 376 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 PTPN11Q06124 597 aaPredicted RBP23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 ZNF518BQ9C0D4 1074 aa23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.42■■□□□ 1.34
CTDSPL-206ENST00000443503 CELF2O95319 508 aaKnown RBP23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 MROH9Q5TGP6 573 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 EXD1Q8NHP7 514 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 CAVIN3Q969G5 261 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 PPP1R36Q96LQ0 422 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 MON2Q7Z3U7 1717 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 ANKRD63C9JTQ0 380 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 SLC26A2P50443 739 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 KCNMA1Q12791 1236 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 CRY2Q49AN0 593 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 C4orf32Q8N8J7 132 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 TRAPPC12Q8WVT3 735 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 ADA2Q9NZK5 511 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 PIK3C2AO00443 1686 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 RCCD1A6NED2 376 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 CCT8L1PA6NM43 557 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 TRIM49D1C9J1S8 452 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 ENO1P06733 434 aaKnown RBP23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 INSRRP14616 1297 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 ACO1P21399 889 aaKnown RBP23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 RFC1P35251 1148 aaPredicted RBP23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 PGM1P36871 562 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 MMP14P50281 582 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 DCAF4L1Q3SXM0 396 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 ACTL9Q8TC94 416 aa23.41■■□□□ 1.34
CTDSPL-206ENST00000443503 E5RI56 91 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 H3BRB1 525 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 FAM153BP0C7A2 387 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 PYGMP11217 842 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 EPHB2P29323 1055 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 GCNT1Q02742 428 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 FAM153CQ494X1 144 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 GLB1LQ6UWU2 654 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 RGS9BPQ6ZS82 235 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 KIF2BQ8N4N8 673 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 CCDC33Q8N5R6 958 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 TUT1Q9H6E5 874 aaKnown RBP23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 FAM153AQ9UHL3 310 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 TSR3Q9UJK0 312 aaKnown RBP23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 KRT4P19013 534 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 PNPLA4P41247 253 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 LRRC6Q86X45 466 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 FAM167BQ9BTA0 163 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 DDIT4Q9NX09 232 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 WHRNQ9P202 907 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 CYP3A7-CYP3A51PA0A087WV96 503 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 EIF4E1BA6NMX2 242 aaKnown RBP23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 PDHA1P08559 390 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 CYP3A7P24462 503 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 USP10Q14694 798 aaKnown RBP23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 NOP9Q86U38 636 aaKnown RBP23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 MAP4K3Q8IVH8 894 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 ZNF669Q96BR6 464 aaPredicted RBP23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 P2RX7Q99572 595 aaKnown RBP23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 TRIM4Q9C037 500 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 ACP6Q9NPH0 428 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 M0QYT0 321 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 GEMIN4P57678 1058 aaKnown RBP23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 RAET1EQ8TD07 263 aa23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 SUDS3Q9H7L9 328 aaPredicted RBP23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.4■■□□□ 1.34
CTDSPL-206ENST00000443503 CYP2C8P10632 490 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms