RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 SFR1Q86XK3 245 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 CMTM8Q8IZV2 173 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 SYNPOQ8N3V7 929 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 MAB21L3Q8N8X9 362 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 ZSWIM2Q8NEG5 633 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 USP13Q92995 863 aaPredicted RBP9□□□□□ -0.97
TOP3B-209ENST00000442653 MS4A3Q96HJ5 214 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 GCNAQ96QF7 691 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 CCSER1Q9C0I3 900 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 ST6GALNAC4Q9H4F1 302 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 EBF3Q9H4W6 596 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 GKN1Q9NS71 199 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 RXFP3Q9NSD7 469 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 AGO2Q9UKV8 859 aaKnown RBP9□□□□□ -0.97
TOP3B-209ENST00000442653 AKAP13Q12802 2813 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 WDFY3Q8IZQ1 3526 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 OBSL1O75147 1896 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 ATG2BQ96BY7 2078 aa9□□□□□ -0.97
TOP3B-209ENST00000442653 IGF2RP11717 2491 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 DENND4CQ5VZ89 1909 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 KPNA7A9QM74 516 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 F11P03951 625 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 ARSAP15289 507 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 LONP1P36776 959 aaKnown RBP8.99□□□□□ -0.97
TOP3B-209ENST00000442653 RUNX3Q13761 415 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 SF3A2Q15428 464 aaKnown RBP8.99□□□□□ -0.97
TOP3B-209ENST00000442653 SF3A1Q15459 793 aaKnown RBP8.99□□□□□ -0.97
TOP3B-209ENST00000442653 TAF12Q16514 161 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 TMEM196Q5HYL7 178 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 SDHAF4Q5VUM1 108 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 CEP68Q76N32 757 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 ZNF720Q7Z2F6 126 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 KBTBD6Q86V97 674 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 WDR5BQ86VZ2 330 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 METTL23Q86XA0 190 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 THEM5Q8N1Q8 247 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 PDCL2Q8N4E4 241 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 RASSF8Q8NHQ8 419 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 SPPL2BQ8TCT7 592 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 C2orf15Q8WU43 125 aaKnown RBP8.99□□□□□ -0.97
TOP3B-209ENST00000442653 POMGNT1Q8WZA1 660 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 LARP4BQ92615 738 aaKnown RBP8.99□□□□□ -0.97
TOP3B-209ENST00000442653 EPSTI1Q96J88 318 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 STRA6Q9BX79 667 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 FBRSL1Q9HCM7 1045 aaKnown RBP8.99□□□□□ -0.97
TOP3B-209ENST00000442653 THG1LQ9NWX6 298 aaKnown RBP8.99□□□□□ -0.97
TOP3B-209ENST00000442653 PCDHB13Q9Y5F0 798 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 TCHHQ07283 1943 aa8.99□□□□□ -0.97
TOP3B-209ENST00000442653 ZFYVE26Q68DK2 2539 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 GREB1Q4ZG55 1949 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 DSPP15924 2871 aaKnown RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 TRDMT1O14717 391 aaKnown RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 HCRTO43612 131 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 TADA3O75528 432 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 RPP40O75818 363 aaKnown RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 EGFP01133 1207 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 ACAT1P24752 427 aaKnown RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 POLR2BP30876 1174 aaKnown RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 DDIT3P35638 169 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 AVPR1AP37288 418 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 RAP1GAPP47736 663 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 TFAMQ00059 246 aaKnown RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 POU5F1Q01860 360 aaKnown RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 SMARCB1Q12824 385 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 BFSP1Q12934 665 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 SV2CQ496J9 727 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 LARP1BQ659C4 914 aaKnown RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 SLFN12LQ6IEE8 588 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 DYMQ7RTS9 669 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 MON1AQ86VX9 555 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 C1orf127Q8N9H9 656 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 KRI1Q8N9T8 703 aaKnown RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 CXorf38Q8TB03 319 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 GAB3Q8WWW8 586 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 EZH1Q92800 747 aaPredicted RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 SLC22A12Q96S37 553 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 PKMYT1Q99640 499 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 FAM213AQ9BRX8 229 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 PI4K2AQ9BTU6 479 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 ARRDC1-AS1Q9H2J1 176 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 TDP1Q9NUW8 608 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 ZMYM5Q9UJ78 669 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 L1RE1Q9UN81 338 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 MAGED2Q9UNF1 606 aaPredicted RBP8.98□□□□□ -0.97
TOP3B-209ENST00000442653 SMC3Q9UQE7 1217 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 PCDHB5Q9Y5E4 795 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 EML5Q05BV3 1969 aa8.98□□□□□ -0.97
TOP3B-209ENST00000442653 MYMKA6NI61 221 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 AXIN1O15169 862 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 RNF40O75150 1001 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 PRPF40AO75400 957 aaKnown RBP8.97□□□□□ -0.97
TOP3B-209ENST00000442653 IL18RAPO95256 599 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 BMP15O95972 392 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 ITGB3P05106 788 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 CYP2F1P24903 491 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 ABCD1P33897 745 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 GJA4P35212 333 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 CASP5P51878 434 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 TSPY1Q01534 308 aa8.97□□□□□ -0.97
TOP3B-209ENST00000442653 GRSF1Q12849 480 aaKnown RBP eCLIP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms