RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 GCNT1Q02742 428 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 TRAF1Q13077 416 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 CDO1Q16878 200 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 TMEM132AQ24JP5 1023 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 C3orf62Q6ZUJ4 267 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 MCF2L2Q86YR7 1114 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 GPC2Q8N158 579 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 LRRC71Q8N4P6 559 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 ACTL9Q8TC94 416 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 TBC1D10AQ9BXI6 508 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 CALN1Q9BXU9 219 aa13.82□□□□□ -0.2
SLC48A1-201ENST00000442218 MKI67P46013 3256 aaKnown RBP13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 CST8O60676 142 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 CYP1A1P04798 512 aaPredicted RBP13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 CTCFP49711 727 aaPredicted RBP13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 OTUD4Q01804 1114 aaKnown RBP13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 MMRN1Q13201 1228 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 EMC2Q15006 297 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 SH3PXD2AQ5TCZ1 1133 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 NAIF1Q69YI7 327 aaPredicted RBP13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 VSIG10LQ86VR7 867 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 FAM13CQ8NE31 585 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 TCP10LQ8TDR4 215 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 TRAPPC12Q8WVT3 735 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 NUDCD1Q96RS6 583 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 SENP7Q9BQF6 1050 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 EBF2Q9HAK2 575 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 JPH1Q9HDC5 661 aaPredicted RBP13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 POLIQ9UNA4 740 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 NR2E3Q9Y5X4 410 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 DNALI1O14645 258 aaPredicted RBP13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 T-ENOLP0DO92 83 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 KCNA2P16389 499 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 YBX3P16989 372 aaKnown RBP eCLIP13.81□□□□□ -0.22e-7■■□□□ 12.5
SLC48A1-201ENST00000442218 GLRA2P23416 452 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 IL1R2P27930 398 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 RFC1P35251 1148 aaPredicted RBP13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 SPARCL1Q14515 664 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 STAT4Q14765 748 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 SPOCD1Q6ZMY3 1216 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 ASRGL1Q7L266 308 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 APBB1IPQ7Z5R6 666 aaPredicted RBP13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 CROCCP2Q86T23 111 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 ZCCHC9Q8N567 271 aaKnown RBP13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 PYROXD1Q8WU10 500 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 CFAP57Q96MR6 1250 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 SBF1O95248 1867 aa13.81□□□□□ -0.2
SLC48A1-201ENST00000442218 STBD1O95210 358 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 MUTP22033 750 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 ABL2P42684 1182 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 KRT76Q01546 638 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 IGDCC3Q8IVU1 814 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 UNC45BQ8IWX7 931 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 TMC2Q8TDI7 906 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 MECRQ9BV79 373 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 ZNF214Q9UL59 606 aaPredicted RBP13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 EXTL3O43909 919 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 PLA2G6O60733 806 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 TOP3BO95985 862 aaKnown RBP13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 JAK3P52333 1124 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 PPP1R21Q6ZMI0 780 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 MOB2Q70IA6 237 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 KIAA0319LQ8IZA0 1049 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 FBXO36Q8NEA4 188 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 ZNF75CPQ92670 426 aaPredicted RBP13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 FBXL18Q96ME1 805 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 WDR83Q9BRX9 315 aaKnown RBP13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 SYT17Q9BSW7 474 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 PIH1D1Q9NWS0 290 aaKnown RBP13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 DONSONQ9NYP3 566 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 RNF181Q9P0P0 153 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 SLC9A2Q9UBY0 812 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 CLUHO75153 1309 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 E2F8A0AVK6 867 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 PTPRAP18433 802 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 PSMA2P25787 234 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 GCKP35557 465 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 PCK1P35558 622 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 SLC1A1P43005 524 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 BACE1P56817 501 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 HIF1AQ16665 826 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 NLRP9Q7RTR0 991 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 USP37Q86T82 979 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 CTAGE3PQ8IX95 158 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 SYNCQ9H7C4 482 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 ZFP69BQ9UJL9 534 aa13.8□□□□□ -0.2
SLC48A1-201ENST00000442218 MAP3K13O43283 966 aa13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 TMEM63AO94886 807 aa13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 PGK2P07205 417 aa13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 F7P08709 466 aaPredicted RBP13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 CCNHP51946 323 aaPredicted RBP13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 ZBTB16Q05516 673 aa13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 PTP4A2Q12974 167 aa13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 TCEAL1Q15170 157 aa13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 SGSM1Q2NKQ1 1148 aa13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 TREML2Q5T2D2 321 aa13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 DSTYKQ6XUX3 929 aa13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 APOBEC3FQ8IUX4 373 aaKnown RBP13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 KATNAL2Q8IYT4 538 aa13.79□□□□□ -0.2
SLC48A1-201ENST00000442218 SLCO2A1Q92959 643 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms