RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ZRSR1Q15695 479 aaKnown RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CLPPQ16740 277 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CCDC157Q569K6 752 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MBNL2Q5VZF2 373 aaKnown RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 RFX8Q6ZV50 586 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CXorf67Q86X51 503 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 EFCAB13Q8IY85 973 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 C17orf53Q8N3J3 647 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MARCH10Q8NA82 808 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 BRI3BPQ8WY22 251 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ATP2A3Q93084 1043 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TREX2Q9BQ50 279 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NTPCRQ9BSD7 190 aaKnown RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DDX23Q9BUQ8 820 aaKnown RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TMEM120AQ9BXJ8 343 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LIN28AQ9H9Z2 209 aaKnown RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 A1CFQ9NQ94 594 aaKnown RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 STXBP5LQ9Y2K9 1186 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TMED5Q9Y3A6 229 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 AP1M2Q9Y6Q5 423 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ARHGEF40Q8TER5 1519 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SCDO00767 359 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ERLIN1O75477 346 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 EOMESO95936 686 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 AMY2AP04746 511 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 S100A6P06703 90 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 POLBP06746 335 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 RHOXF2BP0C7M4 288 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GNAT1P11488 350 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GAP43P17677 238 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 AMY2BP19961 511 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PEX5P50542 639 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ETV1P50549 477 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ARL4CP56559 192 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 BCAR1P56945 870 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CORO7P57737 925 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CCNA1P78396 465 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZNF543Q08ER8 600 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TRIM28Q13263 835 aaKnown RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SGCGQ13326 291 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NEDD9Q14511 834 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KRBOX4Q5JUW0 171 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 HHATQ5VTY9 493 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 METTL11BQ5VVY1 283 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NAIF1Q69YI7 327 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MCTP1Q6DN14 999 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CCDC62Q6P9F0 684 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 APOA5Q6Q788 366 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 DGLUCYQ7Z3D6 616 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LIX1LQ8IVB5 337 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CCDC33Q8N5R6 958 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ANKRD52Q8NB46 1076 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GIMAP7Q8NHV1 300 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CTCFLQ8NI51 663 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KLHDC4Q8TBB5 520 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 AUTS2Q8WXX7 1259 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 RAX2Q96IS3 184 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 RHOXF2Q9BQY4 288 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ACAT2Q9BWD1 397 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 JAM3Q9BX67 310 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 C2orf40Q9H1Z8 148 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZSCAN16Q9H4T2 348 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ACAD9Q9H845 621 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TTC12Q9H892 705 aaPredicted RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SUGCTQ9HAC7 445 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 FAM105AQ9NUU6 356 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CLDND1Q9NY35 253 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 IL20Q9NYY1 176 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PTBP2Q9UKA9 531 aaKnown RBP6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZNF711Q9Y462 761 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CD163L1Q9NR16 1453 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KIF20BQ96Q89 1820 aa6.28□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KIF13AQ9H1H9 1805 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MEGF11A6BM72 1044 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ATP8B1O43520 1251 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MBD3O95983 291 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PLATP00750 562 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MAPK3P27361 379 aaPredicted RBP6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 RARSP54136 660 aaKnown RBP6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SMAD1Q15797 465 aaKnown RBP6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CEP55Q53EZ4 464 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 DCAF17Q5H9S7 520 aaPredicted RBP6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CPZQ66K79 652 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FSTL4Q6MZW2 842 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FBXO38Q6PIJ6 1188 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 COL23A1Q86Y22 540 aaPredicted RBP6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 OR8H3Q8N146 312 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 C12orf50Q8NA57 414 aaPredicted RBP6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TOR1AIP2Q8NFQ8 470 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 OR6C4Q8NGE1 309 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MOSPD2Q8NHP6 518 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 DNAAF4Q8WXU2 420 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ERO1AQ96HE7 468 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZNF845Q96IR2 970 aaPredicted RBP6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PLEKHG4BQ96PX9 1271 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZPBPQ9BS86 351 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CRACR2AQ9BSW2 395 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TRIM5Q9C035 493 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CDIP1Q9H305 208 aa6.27□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 GSX1Q9H4S2 264 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms