RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 BEGAINQ9BUH8 593 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 OXCT2Q9BYC2 517 aaPredicted RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 ASPSCR1Q9BZE9 553 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 ALG13Q9NP73 1137 aaKnown RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 NDUFA13Q9P0J0 144 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 CNOT7Q9UIV1 285 aaKnown RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 TRPC5Q9UL62 973 aaPredicted RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 SH3GLB1Q9Y371 365 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 ARHGAP23Q9P227 1491 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 O00370 1275 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 PIK3R2O00459 728 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 GH2P01242 217 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 MARK3P27448 753 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 BTG3Q14201 252 aaPredicted RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 CLPPQ16740 277 aaPredicted RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 FAM47CQ5HY64 1035 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 LRRC8BQ6P9F7 803 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 RCOR2Q8IZ40 523 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 LSM14AQ8ND56 463 aaKnown RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 HIPK4Q8NE63 616 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 MCUQ8NE86 351 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 NSUN6Q8TEA1 469 aaKnown RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 CASP10Q92851 521 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 DACT3Q96B18 629 aaPredicted RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 FAM118BQ9BPY3 351 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 UBN1Q9NPG3 1134 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 HOXC10Q9NYD6 342 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 SCHIP1Q9P0W5 487 aaPredicted RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 NXF1Q9UBU9 619 aaKnown RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 HERC5Q9UII4 1024 aaKnown RBP6.65□□□□□ -1.34
BDNF-211ENST00000439476 SALL4Q9UJQ4 1053 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 TRIM17Q9Y577 477 aa6.65□□□□□ -1.34
BDNF-211ENST00000439476 TMEM221A6NGB7 291 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 GOLGA8RI6L899 631 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 SGTAO43765 313 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 CCDC159P0C7I6 412 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 CD58P19256 250 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 DRD4P21917 467 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 MAGEA4P43358 317 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 PRKG1Q13976 671 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 STXBP2Q15833 593 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 QPCTQ16769 361 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 SPOUT1Q5T280 376 aaKnown RBP6.65□□□□□ -1.35
BDNF-211ENST00000439476 GADL1Q6ZQY3 521 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 HAUS6Q7Z4H7 955 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 DPP9Q86TI2 863 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 ZNF677Q86XU0 584 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 PLPP6Q8IY26 295 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 BEST2Q8NFU1 509 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 CFAP36Q96G28 342 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 KCNK16Q96T55 309 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 MUC3BQ9H195 1237 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 EML4Q9HC35 981 aaKnown RBP6.65□□□□□ -1.35
BDNF-211ENST00000439476 KRT82Q9NSB4 513 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 HAO1Q9UJM8 370 aa6.65□□□□□ -1.35
BDNF-211ENST00000439476 H3BRJ5 948 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 RIPK2O43353 540 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 GFAPP14136 432 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 CDH2P19022 906 aaPredicted RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 PGM1P36871 562 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ERFP50548 548 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 NOP14P78316 857 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 AP1B1Q10567 949 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MTMR1Q13613 665 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 EFTUD2Q15029 972 aaKnown RBP eCLIP6.64□□□□□ -1.35
BDNF-211ENST00000439476 KCTD19Q17RG1 926 aaPredicted RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 MTERF2Q49AM1 385 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 TMTC4Q5T4D3 741 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 TMEM270Q6UE05 265 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 C3orf67Q6ZVT6 689 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ANKMY2Q8IV38 441 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 NUDCD3Q8IVD9 361 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 THEM5Q8N1Q8 247 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 SCFD2Q8WU76 684 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ZFPM2Q8WW38 1151 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 NAF1Q96HR8 494 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 ING2Q9H160 280 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 CCSER2Q9H7U1 834 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 DBNDD1Q9H9R9 158 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 RXFP1Q9HBX9 757 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 DLGAP2Q9P1A6 1054 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ITGB1BP2Q9UKP3 347 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 NEU2Q9Y3R4 380 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ZNF335Q9H4Z2 1342 aaPredicted RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 ARPC4-TTLL3A0A0A6YYG9 625 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 C16orf96A6NNT2 1141 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 PI4K2BG5E9Z4 385 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 MAN1A2O60476 641 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 FOXD2O60548 495 aaPredicted RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 TRPA1O75762 1119 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 KLHL2O95198 593 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 SHBGP04278 402 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 IL10P22301 178 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 RPL21P46778 160 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 IREB2P48200 963 aaKnown RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 ALDH5A1P51649 535 aaPredicted RBP6.64□□□□□ -1.35
BDNF-211ENST00000439476 GPSM2P81274 684 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ROR1Q01973 937 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 CNGA3Q16281 694 aa6.64□□□□□ -1.35
BDNF-211ENST00000439476 ZNF699Q32M78 642 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms