RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 BFSP1Q12934 665 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 SLC1A5Q15758 541 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 CCDC174Q6PII3 467 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 MOXD1Q6UVY6 613 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 RELL1Q8IUW5 271 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 CCNJLQ8IV13 435 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 PPFIBP2Q8ND30 876 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 TRPV1Q8NER1 839 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 ATL2Q8NHH9 583 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 SOCS4Q8WXH5 440 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 ZNF653Q96CK0 615 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 BTBD10Q9BSF8 475 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 KIAA1586Q9HCI6 787 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 NPHS2Q9NP85 383 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 AGPAT3Q9NRZ7 376 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 PDP2Q9P2J9 529 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 NUMBLQ9Y6R0 609 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 FDX1P10109 184 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 MAGEA4P43358 317 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 SERPINB4P48594 390 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 QRICH1Q2TAL8 776 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 HHATQ5VTY9 493 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 NOP9Q86U38 636 aaKnown RBP9.02□□□□□ -0.97
HPS4-206ENST00000439453 SESTD1Q86VW0 696 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 CPXCR1Q8N123 301 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 C4orf33Q8N1A6 199 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 RDH13Q8NBN7 331 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 VTI1AQ96AJ9 217 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 SMC6Q96SB8 1091 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 LBHD1Q9BQE6 289 aaPredicted RBP9.02□□□□□ -0.97
HPS4-206ENST00000439453 GLT8D2Q9H1C3 349 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 STK24Q9Y6E0 443 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 NFIBO00712 420 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 TBX3O15119 743 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 GSC2O15499 205 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 TBX10O75333 385 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 ZWINTO95229 277 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 PGK2P07205 417 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 KRT15P19012 456 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 CA4P22748 312 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 RANBP1P43487 201 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 ARHGAP4P98171 946 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 GHRHRQ02643 423 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 FYB2Q5VWT5 728 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 IZUMO3Q5VZ72 239 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 NCAPG2Q86XI2 1143 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 BBOF1Q8ND07 529 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 FAM81AQ8TBF8 368 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 DTX3LQ8TDB6 740 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 EPS8L1Q8TE68 723 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 ZNF75CPQ92670 426 aaPredicted RBP9.02□□□□□ -0.97
HPS4-206ENST00000439453 PTPRN2Q92932 1015 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 DTNBP1Q96EV8 351 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 APBA2Q99767 749 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 HERPUD2Q9BSE4 406 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 SYNCQ9H7C4 482 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 DMAP1Q9NPF5 467 aaPredicted RBP9.02□□□□□ -0.97
HPS4-206ENST00000439453 ARL8BQ9NVJ2 186 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 UVRAGQ9P2Y5 699 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 GTF3C4Q9UKN8 822 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 WDR81Q562E7 1941 aa9.02□□□□□ -0.97
HPS4-206ENST00000439453 POC1B-GALNT4F8VUJ3 575 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 MAP3K7O43318 606 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 ZBED4O75132 1171 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 GSTT1P30711 240 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 CCNA1P78396 465 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 LRRC23Q53EV4 343 aaPredicted RBP9.01□□□□□ -0.97
HPS4-206ENST00000439453 ARMC3Q5W041 872 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 ZNF398Q8TD17 642 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 CFAP57Q96MR6 1250 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 RBM15Q96T37 977 aaKnown RBP eCLIP9.01□□□□□ -0.972e-6■■■■□ 23.7
HPS4-206ENST00000439453 EIF2AK1Q9BQI3 630 aaKnown RBP9.01□□□□□ -0.97
HPS4-206ENST00000439453 KATNBL1Q9H079 304 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 NOCTQ9UK39 431 aaKnown RBP9.01□□□□□ -0.97
HPS4-206ENST00000439453 R3HDM2Q9Y2K5 976 aaKnown RBP9.01□□□□□ -0.97
HPS4-206ENST00000439453 NEU2Q9Y3R4 380 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 EMSYQ7Z589 1322 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 ADCY3O60266 1144 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 FGFR1P11362 822 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 Q4G0T1 1027 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 PLEKHG4Q58EX7 1191 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 ZNF365Q70YC5 407 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 TDRPQ86YL5 185 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 SLC5A5Q92911 643 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 KAT5Q92993 513 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 PTCD3Q96EY7 689 aaKnown RBP9.01□□□□□ -0.97
HPS4-206ENST00000439453 POLR3CQ9BUI4 534 aaPredicted RBP9.01□□□□□ -0.97
HPS4-206ENST00000439453 PARVGQ9HBI0 331 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 STX18Q9P2W9 335 aaKnown RBP9.01□□□□□ -0.97
HPS4-206ENST00000439453 GYG2O15488 501 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 STRNO43815 780 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 TROVE2P10155 538 aaKnown RBP eCLIP9.01□□□□□ -0.97
HPS4-206ENST00000439453 CYP2B6P20813 491 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 GRK4P32298 578 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 DLG4P78352 724 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 ZC3H12AQ5D1E8 599 aaKnown RBP9.01□□□□□ -0.97
HPS4-206ENST00000439453 SLC30A10Q6XR72 485 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 ZNF720Q7Z2F6 126 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 SLAIN1Q8ND83 568 aa9.01□□□□□ -0.97
HPS4-206ENST00000439453 STMN2Q93045 179 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms