RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 HELQQ8TDG4 1101 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 PPP1R2P1Q96PQ5 205 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 GAD1Q99259 594 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 FTHL17Q9BXU8 183 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 L3MBTL1Q9Y468 752 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 SUN1O94901 812 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 KITP10721 976 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 SPRYD7Q5W111 196 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 KIAA1324Q6UXG2 1013 aaKnown RBP12.64□□□□□ -0.39
NEK1-201ENST00000439128 SLC13A1Q9BZW2 595 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 CD274Q9NZQ7 290 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 HEATR9A2RTY3 570 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 ADCY6O43306 1168 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 ACAD11Q709F0 780 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 LMNTD2Q8IXW0 634 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 BLOC1S5Q8TDH9 187 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 CAPS2Q9BXY5 557 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 TLE6Q9H808 572 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 PYCARDQ9ULZ3 195 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 TTC26A0AVF1 554 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 TEX33O43247 280 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 RHOBTB3O94955 611 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 ERVK-10P10266 1014 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 MLH1P40692 756 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 TKTL1P51854 596 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 SESN3P58005 492 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 CAV1Q03135 178 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.39
NEK1-201ENST00000439128 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 FBXO44Q9H4M3 255 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 EVA1BQ9NVM1 165 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 NWD1Q149M9 1564 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 CA12O43570 354 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 ADH1AP07327 375 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 ZBTB48P10074 688 aaPredicted RBP12.63□□□□□ -0.39
NEK1-201ENST00000439128 UCHL3P15374 230 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 YWHAQP27348 245 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 ARHGAP25P42331 645 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 SCNN1GP51170 649 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 IZUMO3Q5VZ72 239 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 KLRG1Q96E93 195 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 CAMKK2Q96RR4 588 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 FHOD1Q9Y613 1164 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 PMPCBO75439 489 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 CERS5Q8N5B7 392 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 FBXL5Q9UKA1 691 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 ITGA11Q9UKX5 1188 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 CXCL14O95715 111 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 UBA1P22314 1058 aaKnown RBP12.63□□□□□ -0.39
NEK1-201ENST00000439128 DPYDQ12882 1025 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 CCDC137Q6PK04 289 aaKnown RBP12.63□□□□□ -0.39
NEK1-201ENST00000439128 TPGS1Q6ZTW0 290 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 ASAH2Q9NR71 780 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 RAB6BQ9NRW1 208 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 RNF19AQ9NV58 838 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 NFU1Q9UMS0 254 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 HNRNPCL2B2RXH8 293 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 HNRNPCL1O60812 293 aaKnown RBP12.63□□□□□ -0.39
NEK1-201ENST00000439128 AOC2O75106 756 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 FBXO21O94952 628 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 SLC9A1P19634 815 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 NBPF20Q3BBV1 942 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 PHLDB3Q6NSJ2 640 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 ZNF507Q8TCN5 953 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 UBXN6Q9BZV1 441 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 C6orf203Q9P0P8 240 aaPredicted RBP12.63□□□□□ -0.39
NEK1-201ENST00000439128 SFMBT1Q9UHJ3 866 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 NFASCO94856 1347 aa12.63□□□□□ -0.39
NEK1-201ENST00000439128 C2orf81A6NN90 581 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
NEK1-201ENST00000439128 GARTP22102 1010 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 CASP4P49662 377 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 ITGA7Q13683 1181 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 ERAP2Q6P179 960 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 ANKMY2Q8IV38 441 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 SNF8Q96H20 258 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 TEX12Q9BXU0 123 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 GIMAP4Q9NUV9 329 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 NOVA2Q9UNW9 492 aaKnown RBP12.62□□□□□ -0.39
NEK1-201ENST00000439128 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.62□□□□□ -0.39
NEK1-201ENST00000439128 BCORL1Q5H9F3 1711 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 CD52P31358 61 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 APLP1P51693 650 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 METTL16Q86W50 562 aaKnown RBP12.62□□□□□ -0.39
NEK1-201ENST00000439128 WDR49Q8IV35 697 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 SLC35G2Q8TBE7 412 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 SUSD6Q92537 303 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 POP1Q99575 1024 aaKnown RBP12.62□□□□□ -0.39
NEK1-201ENST00000439128 CYP39A1Q9NYL5 469 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 UVRAGQ9P2Y5 699 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 FAM110CQ1W6H9 321 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 RRM2BQ7LG56 351 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 DSG4Q86SJ6 1040 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 ADSSL1Q8N142 457 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 KRT35Q92764 455 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 MKNK1Q9BUB5 465 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 SPG21Q9NZD8 308 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 SUPT3HB4E1H0 165 aa12.62□□□□□ -0.39
NEK1-201ENST00000439128 SUPT3HO75486 399 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms