RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 GSTA3Q16772 222 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 ARHGEF19Q8IW93 802 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 USP38Q8NB14 1042 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 GORASP1Q9BQQ3 440 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 GOLPH3Q9H4A6 298 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 SH3GLB1Q9Y371 365 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 CDHR2Q9BYE9 1310 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 UBE2QL1A1L167 161 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
PTCH1-209ENST00000437951 CCDC130P13994 396 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 PRLRP16471 622 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 SFNP31947 248 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 BTDP43251 543 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 PHKA2P46019 1235 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 SKIV2LQ15477 1246 aaKnown RBP11.98□□□□□ -0.49
PTCH1-209ENST00000437951 ANKMY2Q8IV38 441 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 AP3S1Q92572 193 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 PPP1R36Q96LQ0 422 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 C11orf70Q9BRQ4 267 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 MAPRE3Q9UPY8 281 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 KIAA0556O60303 1618 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 ERVV-2B6SEH9 535 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 APRTP07741 180 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 ADD2P35612 726 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 HSD17B3P37058 310 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 FDFT1P37268 417 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 ERO1BQ86YB8 467 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 HEY2Q9UBP5 337 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 H3BMM5 538 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 M0QYV0 167 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 FSBPO95073 299 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 ALOX12P18054 663 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 PRELPP51888 382 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 PSMD4P55036 377 aaKnown RBP11.98□□□□□ -0.49
PTCH1-209ENST00000437951 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 LIN54Q6MZP7 749 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 JAMLQ86YT9 394 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 ALG13Q9NP73 1137 aaKnown RBP11.98□□□□□ -0.49
PTCH1-209ENST00000437951 INTS13Q9NVM9 706 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 CYP39A1Q9NYL5 469 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 CD274Q9NZQ7 290 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 POTECB2RU33 542 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-209ENST00000437951 GMFBP60983 142 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 SLC35G2Q8TBE7 412 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 HAVCR1Q96D42 359 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 RSAD1Q9HA92 442 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 TMBIM4Q9HC24 238 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 ATXN2Q99700 1313 aaKnown RBP11.98□□□□□ -0.49
PTCH1-209ENST00000437951 SYNDIG1LA6NDD5 238 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 MYL12AP19105 171 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 STX4Q12846 297 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 METTL5Q9NRN9 209 aaKnown RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 GGA2Q9UJY4 613 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 USP21Q9UK80 565 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 PEX1O43933 1283 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 PCCAP05165 728 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 PAX7P23759 505 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 HNMTP50135 292 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 ACLYP53396 1101 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 SPIRE1Q08AE8 756 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 ITGA9Q13797 1035 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 SNX30Q5VWJ9 437 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 TAF8Q7Z7C8 310 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 TCAIMQ8N3R3 496 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 ZNF507Q8TCN5 953 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 EFHD2Q96C19 240 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 TBC1D22BQ9NU19 505 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 ATXN10Q9UBB4 475 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 MARCOQ9UEW3 520 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 HAO1Q9UJM8 370 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 GSTK1Q9Y2Q3 226 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 HBS1LQ9Y450 684 aaKnown RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 ADCY6O43306 1168 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 FAM20BO75063 409 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 HOXB6P17509 224 aaKnown RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 CDH3P22223 829 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 CDK17Q00537 523 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 SEL1L3Q68CR1 1132 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 YTHDF3Q7Z739 585 aaKnown RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 IFNEQ86WN2 208 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 ZNF333Q96JL9 665 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 KAT6AQ92794 2004 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 ATP4AP20648 1035 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 RPS8P62241 208 aaKnown RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 HIST2H2ACQ16777 129 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 FAM102AQ5T9C2 384 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 HIST2H2AA3Q6FI13 130 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 NAT9Q9BTE0 207 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 VTI1BQ9UEU0 232 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 GDAQ9Y2T3 454 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 PKP3Q9Y446 797 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 STARP49675 285 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 CYP51A1Q16850 503 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 SPDYCQ5MJ68 293 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 C4orf33Q8N1A6 199 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 CENPTQ96BT3 561 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms