RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 CCDC85BQ15834 202 aaPredicted RBP12.41□□□□□ -0.42
APTX-208ENST00000436040 ADGRD2Q7Z7M1 963 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 OTUD6BQ8N6M0 293 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 GPATCH11Q8N954 259 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 MRPL43Q8N983 215 aaKnown RBP12.41□□□□□ -0.42
APTX-208ENST00000436040 ZBTB9Q96C00 473 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 CABS1Q96KC9 395 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 CAPZA3Q96KX2 299 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 MFSD14AQ96MC6 490 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 THAP9Q9H5L6 903 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 CXorf56Q9H5V9 222 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 CHST7Q9NS84 486 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 SSX2IPQ9Y2D8 614 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 SCN1AP35498 2009 aa12.41□□□□□ -0.42
APTX-208ENST00000436040 C2orf71A6NGG8 1288 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 RNF225M0QZC1 329 aaPredicted RBP12.4□□□□□ -0.42
APTX-208ENST00000436040 MAPK13O15264 365 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 TRAPPC3O43617 180 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 SLC34A2O95436 690 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 CXCL14O95715 111 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 URODP06132 367 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 TRIM49P0CI25 452 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 TRIM49CP0CI26 452 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.42
APTX-208ENST00000436040 RPL13P26373 211 aaKnown RBP12.4□□□□□ -0.42
APTX-208ENST00000436040 TNFRSF8P28908 595 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 FKBP3Q00688 224 aaKnown RBP12.4□□□□□ -0.42
APTX-208ENST00000436040 DSG1Q02413 1049 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 USP41Q3LFD5 358 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 GLE1Q53GS7 698 aaKnown RBP12.4□□□□□ -0.42
APTX-208ENST00000436040 TAS1R1Q7RTX1 841 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 OR5B17Q8NGF7 314 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 ZNF516Q92618 1163 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 SECISBP2LQ93073 1101 aaKnown RBP12.4□□□□□ -0.42
APTX-208ENST00000436040 CDCA3Q99618 268 aaPredicted RBP12.4□□□□□ -0.42
APTX-208ENST00000436040 TSG101Q99816 390 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 MMRN2Q9H8L6 949 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 GGA2Q9UJY4 613 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 COL6A3P12111 3177 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 HIDE1A8MVS5 230 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 H0YHG0 523 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 NDUFAB1O14561 156 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 NCK2O43639 380 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 LILRB3O75022 631 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 SRGAP2O75044 1071 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 FSBPO95073 299 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 PAX3P23760 479 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 LRRC63Q05C16 580 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 HYAL1Q12794 435 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 COL19A1Q14993 1142 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 SKIDA1Q1XH10 827 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 C1orf220Q5T0J3 134 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 KIAA0319Q5VV43 1072 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 C9orf57Q5W0N0 161 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 SND1Q7KZF4 910 aaKnown RBP eCLIP12.4□□□□□ -0.42
APTX-208ENST00000436040 WDR49Q8IV35 697 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 CAVIN3Q969G5 261 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 BORCS6Q96GS4 357 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 CGRRF1Q99675 332 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.4□□□□□ -0.422e-7■■■■■ 86.5
APTX-208ENST00000436040 MRPL17Q9NRX2 175 aaKnown RBP12.4□□□□□ -0.42
APTX-208ENST00000436040 TRIM10Q9UDY6 481 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 FRMD4BQ9Y2L6 1034 aa12.4□□□□□ -0.42
APTX-208ENST00000436040 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.39□□□□□ -0.43
APTX-208ENST00000436040 SRRM3A6NNA2 597 aaPredicted RBP12.39□□□□□ -0.43
APTX-208ENST00000436040 PIRO00625 290 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 PPEF2O14830 753 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 TACC1O75410 805 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 CCDC172P0C7W6 258 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 TCP1P17987 556 aaKnown RBP12.39□□□□□ -0.43
APTX-208ENST00000436040 ZBED6P86452 979 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 TFAMQ00059 246 aaKnown RBP12.39□□□□□ -0.43
APTX-208ENST00000436040 SPA17Q15506 151 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 DUSP6Q16828 381 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 FAM171A1Q5VUB5 890 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 FOXR2Q6PJQ5 311 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 ZC3H3Q8IXZ2 948 aaKnown RBP12.39□□□□□ -0.43
APTX-208ENST00000436040 FAM186BQ8IYM0 893 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 AUTS2Q8WXX7 1259 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 ANKRD36BP1Q96IX9 119 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 FNBP1Q96RU3 617 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 TTPALQ9BTX7 342 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 TLE6Q9H808 572 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 SNX12Q9UMY4 172 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 NUB1Q9Y5A7 615 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 TSC2P49815 1807 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 CETN3O15182 167 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 TMEM191BP0C7N4 346 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 FGFR3P22607 806 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 BRCC3P46736 316 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 NRIP1P48552 1158 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 CREMQ03060 361 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 KIAA1841Q6NSI8 718 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 PDXDC1Q6P996 788 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 C1orf127Q8N9H9 656 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 SUSD3Q96L08 255 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 MTMR12Q9C0I1 747 aa12.39□□□□□ -0.43
APTX-208ENST00000436040 RXFP1Q9HBX9 757 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms