RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MGAT4DA6NG13 374 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 HS6ST1O60243 411 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 SNRPFP62306 86 aaKnown RBP11.65□□□□□ -0.54
SCN4A-201ENST00000435607 ELAVL2Q12926 359 aaKnown RBP11.65□□□□□ -0.54
SCN4A-201ENST00000435607 CES5AQ6NT32 575 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 PADI4Q9UM07 663 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 CYP2C8P10632 490 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 RGS7P49802 495 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 NFIAQ12857 509 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 STX5Q13190 355 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 ATAD3BQ5T9A4 648 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 FAM45BPQ6NSW5 357 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 XRRA1Q6P2D8 792 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 SPACA7Q96KW9 195 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 EPC1Q9H2F5 836 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 WDCPQ9H6R7 721 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 NDOR1Q9UHB4 597 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 SMG5Q9UPR3 1016 aaKnown RBP11.65□□□□□ -0.54
SCN4A-201ENST00000435607 SOX6P35712 828 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 TMEM62Q0P6H9 643 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 RGL4Q8IZJ4 473 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 PPP1R36Q96LQ0 422 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 VPS33BQ9H267 617 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 UGGT1Q9NYU2 1555 aa11.65□□□□□ -0.55
SCN4A-201ENST00000435607 H0Y3Z8 333 aa11.65□□□□□ -0.55
SCN4A-201ENST00000435607 SERPINB3P29508 390 aa11.65□□□□□ -0.55
SCN4A-201ENST00000435607 NOL9Q5SY16 702 aaKnown RBP11.65□□□□□ -0.55
SCN4A-201ENST00000435607 TMC7Q7Z402 723 aa11.65□□□□□ -0.55
SCN4A-201ENST00000435607 DENND6AQ8IWF6 608 aa11.65□□□□□ -0.55
SCN4A-201ENST00000435607 RFFLQ8WZ73 363 aa11.65□□□□□ -0.55
SCN4A-201ENST00000435607 SERPINB12Q96P63 405 aa11.65□□□□□ -0.55
SCN4A-201ENST00000435607 KCNK16Q96T55 309 aa11.65□□□□□ -0.55
SCN4A-201ENST00000435607 KLHL2O95198 593 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CCDC126Q96EE4 140 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 GOLPH3Q9H4A6 298 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 KLHL3Q9UH77 587 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 ERBB3P21860 1342 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 HALP42357 657 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCN4A-201ENST00000435607 DNAL1Q4LDG9 190 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 AGAP9Q5VTM2 703 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CIPCQ9C0C6 399 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 RCOR1Q9UKL0 485 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 E9PBE3 544 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 GCLCP48506 637 aaPredicted RBP11.64□□□□□ -0.55
SCN4A-201ENST00000435607 PEX6Q13608 980 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 R3HDM1Q15032 1099 aaKnown RBP11.64□□□□□ -0.55
SCN4A-201ENST00000435607 SRBD1Q8N5C6 995 aaKnown RBP11.64□□□□□ -0.55
SCN4A-201ENST00000435607 XPO7Q9UIA9 1087 aaKnown RBP11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CDY2AQ9Y6F7 541 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CDY1Q9Y6F8 540 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 STON1Q9Y6Q2 735 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CDC42BPGQ6DT37 1551 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 ACSL4O60488 711 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 SCARF1Q14162 830 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 RESP18Q5W5W9 173 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 MYO1HQ8N1T3 1032 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 MTERF3Q96E29 417 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 TMEM237Q96Q45 408 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CLPBQ9H078 707 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 KANSL3Q9P2N6 904 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CTNNAL1Q9UBT7 734 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 MFAP3LO75121 409 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 GSTM1P09488 218 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CLK3P49761 638 aaKnown RBP11.64□□□□□ -0.55
SCN4A-201ENST00000435607 STX3Q13277 289 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 ITGA9Q13797 1035 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CCNG2Q16589 344 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 ANGEL2Q5VTE6 544 aaKnown RBP11.64□□□□□ -0.55
SCN4A-201ENST00000435607 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 OSBP2Q969R2 916 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CCT7Q99832 543 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 STARD7Q9NQZ5 370 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 DCDC2Q9UHG0 476 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 PZPP20742 1482 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 A0A087X0T9 212 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CTSEP14091 401 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 LSP1P33241 339 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 TAF13Q15543 124 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 SLFNL1Q499Z3 407 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CCDC92Q53HC0 331 aaPredicted RBP11.64□□□□□ -0.55
SCN4A-201ENST00000435607 SLC25A24Q6NUK1 477 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 CARNMT1Q8N4J0 409 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 GJD4Q96KN9 370 aaPredicted RBP11.64□□□□□ -0.55
SCN4A-201ENST00000435607 AGPAT1Q99943 283 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 RSAD1Q9HA92 442 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 MIEF1Q9NQG6 463 aa11.64□□□□□ -0.55
SCN4A-201ENST00000435607 RRP15Q9Y3B9 282 aaKnown RBP11.64□□□□□ -0.55
SCN4A-201ENST00000435607 GRK4P32298 578 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 MACC1Q6ZN28 852 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 BCL2L14Q9BZR8 327 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 RNF112Q9ULX5 631 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 NCAPD2Q15021 1401 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 TRPC5OSA6NMA1 111 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 SLC16A3O15427 465 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 ENO3P13929 434 aaPredicted RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 IGFBP4P22692 258 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 TRIM32Q13049 653 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 PWP1Q13610 501 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 WLSQ5T9L3 541 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms