RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 HAPLN1P10915 354 aaPredicted RBP19.63■□□□□ 0.73
HLA-F-220ENST00000434407 PTPN2P17706 415 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 SSTR3P32745 418 aaPredicted RBP19.63■□□□□ 0.73
HLA-F-220ENST00000434407 EPHA5P54756 1037 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 CDH8P55286 799 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 NTHL1P78549 312 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 PLD1Q13393 1074 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 CFAP221Q4G0U5 840 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 CCDC183Q5T5S1 534 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 OTOP3Q7RTS5 596 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 IRF2BP1Q8IU81 584 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 OR6B3Q8NGW1 331 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 FUBP3Q96I24 572 aaKnown RBP eCLIP19.63■□□□□ 0.73
HLA-F-220ENST00000434407 IMPG2Q9BZV3 1241 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 SNX25Q9H3E2 840 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 RAB20Q9NX57 234 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 DACH1Q9UI36 760 aa19.63■□□□□ 0.73
HLA-F-220ENST00000434407 ATP2C2O75185 946 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 RHOP08100 348 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 PDGFRBP09619 1106 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 ATXN8OSP0DMR3 200 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 FSHRP23945 695 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 FMO5P49326 533 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 MAPRE1Q15691 268 aaKnown RBP19.62■□□□□ 0.73
HLA-F-220ENST00000434407 CCDC142Q17RM4 750 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 PABPC1LQ4VXU2 614 aaKnown RBP19.62■□□□□ 0.73
HLA-F-220ENST00000434407 PLCD3Q8N3E9 789 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 TDRD5Q8NAT2 981 aaKnown RBP19.62■□□□□ 0.73
HLA-F-220ENST00000434407 MYADMQ96S97 322 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 LRRC3Q9BY71 257 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 CYP3A43Q9HB55 503 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 ABI2Q9NYB9 513 aaPredicted RBP19.62■□□□□ 0.73
HLA-F-220ENST00000434407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.62■□□□□ 0.73
HLA-F-220ENST00000434407 TMEM63CQ9P1W3 806 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 EPS15L1Q9UBC2 864 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 ASB3Q9Y575 518 aa19.62■□□□□ 0.73
HLA-F-220ENST00000434407 MYH10P35580 1976 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 P4HA2O15460 535 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 SOAT2O75908 522 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 CCDC192P0DO97 292 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 RAP1GAPP47736 663 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 ALDH1A3P47895 512 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 EPHB3P54753 998 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 PSMC1P62191 440 aaKnown RBP19.61■□□□□ 0.73
HLA-F-220ENST00000434407 INCA1Q0VD86 236 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 PRSS36Q5K4E3 855 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 SCARA5Q6ZMJ2 495 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 RNF135Q8IUD6 432 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 ELMOD1Q8N336 334 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 MYCBPAPQ8TBZ2 947 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 PSMG2Q969U7 264 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 ACSF2Q96CM8 615 aaPredicted RBP19.61■□□□□ 0.73
HLA-F-220ENST00000434407 ZNF512Q96ME7 567 aaPredicted RBP19.61■□□□□ 0.73
HLA-F-220ENST00000434407 NIF3L1Q9GZT8 377 aa19.61■□□□□ 0.73
HLA-F-220ENST00000434407 ZNF638Q14966 1978 aaKnown RBP19.61■□□□□ 0.73
HLA-F-220ENST00000434407 A8MXQ7 604 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 MICAL2O94851 1124 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 PTPN1P18031 435 aaKnown RBP19.6■□□□□ 0.73
HLA-F-220ENST00000434407 ATF6P18850 670 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 SP100P23497 879 aaPredicted RBP19.6■□□□□ 0.73
HLA-F-220ENST00000434407 MAGEA11P43364 429 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 SLC5A9Q2M3M2 681 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 MGAT5BQ3V5L5 792 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 IQCEQ6IPM2 695 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 C4orf50Q6ZRC1 276 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 UNC93AQ86WB7 457 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 TMC8Q8IU68 726 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 CRYBG2Q8N1P7 616 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 LEMD2Q8NC56 503 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 B3GALNT2Q8NCR0 500 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 CCDC150Q8NCX0 1101 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 ITFG1Q8TB96 612 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 KHSRPQ92945 711 aaKnown RBP eCLIP19.6■□□□□ 0.73
HLA-F-220ENST00000434407 SEPT5Q99719 369 aaPredicted RBP19.6■□□□□ 0.73
HLA-F-220ENST00000434407 DPEP3Q9H4B8 488 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 THAP9Q9H5L6 903 aa19.6■□□□□ 0.73
HLA-F-220ENST00000434407 FAM124BQ9H5Z6 455 aaPredicted RBP19.6■□□□□ 0.73
HLA-F-220ENST00000434407 ZFP37Q9Y6Q3 630 aaPredicted RBP19.6■□□□□ 0.73
HLA-F-220ENST00000434407 CYP2F1P24903 491 aa19.59■□□□□ 0.73
HLA-F-220ENST00000434407 CDR1P51861 262 aa19.59■□□□□ 0.73
HLA-F-220ENST00000434407 KCNH2Q12809 1159 aa19.59■□□□□ 0.73
HLA-F-220ENST00000434407 HS6ST3Q8IZP7 471 aa19.59■□□□□ 0.73
HLA-F-220ENST00000434407 LMO3Q8TAP4 145 aa19.59■□□□□ 0.73
HLA-F-220ENST00000434407 MYLPFQ96A32 169 aa19.59■□□□□ 0.73
HLA-F-220ENST00000434407 PCED1BQ96HM7 432 aa19.59■□□□□ 0.73
HLA-F-220ENST00000434407 CNOT6LQ96LI5 555 aaKnown RBP19.59■□□□□ 0.73
HLA-F-220ENST00000434407 CORO1BQ9BR76 489 aa19.59■□□□□ 0.73
HLA-F-220ENST00000434407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.59■□□□□ 0.73
HLA-F-220ENST00000434407 CDH7Q9ULB5 785 aa19.59■□□□□ 0.73
HLA-F-220ENST00000434407 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.59■□□□□ 0.73
HLA-F-220ENST00000434407 TECTAO75443 2155 aa19.59■□□□□ 0.73
HLA-F-220ENST00000434407 ZNF197O14709 1029 aa19.58■□□□□ 0.72
HLA-F-220ENST00000434407 MOSPD3O75425 235 aa19.58■□□□□ 0.72
HLA-F-220ENST00000434407 LAMP2P13473 410 aa19.58■□□□□ 0.72
HLA-F-220ENST00000434407 CCR2P41597 374 aa19.58■□□□□ 0.72
HLA-F-220ENST00000434407 NDST1P52848 882 aa19.58■□□□□ 0.72
HLA-F-220ENST00000434407 MDH1BQ5I0G3 518 aa19.58■□□□□ 0.72
HLA-F-220ENST00000434407 WDR44Q5JSH3 913 aa19.58■□□□□ 0.72
HLA-F-220ENST00000434407 VSTM1Q6UX27 236 aa19.58■□□□□ 0.72
HLA-F-220ENST00000434407 GET4Q7L5D6 327 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms