RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 TRIM49P0CI25 452 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 TRIM49CP0CI26 452 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 EPB41P11171 864 aaKnown RBP16.3■□□□□ 0.2
PTCD1-204ENST00000430982 LAMP2P13473 410 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 CD44P16070 742 aaKnown RBP16.3■□□□□ 0.2
PTCD1-204ENST00000430982 CCNE1P24864 410 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 PPP1R2P41236 205 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 ATXN1P54253 815 aaKnown RBP16.3■□□□□ 0.2
PTCD1-204ENST00000430982 PMS1P54277 932 aaKnown RBP16.3■□□□□ 0.2
PTCD1-204ENST00000430982 MYL6P60660 151 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 GPR17Q13304 367 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 TDRD10Q5VZ19 366 aaKnown RBP16.3■□□□□ 0.2
PTCD1-204ENST00000430982 INTS8Q75QN2 995 aaKnown RBP16.3■□□□□ 0.2
PTCD1-204ENST00000430982 GRASPQ7Z6J2 395 aaPredicted RBP16.3■□□□□ 0.2
PTCD1-204ENST00000430982 TCEAL8Q8IYN2 117 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 ADGRF2Q8IZF7 708 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 TMEM86AQ8N2M4 240 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 TOP6BLQ8N6T0 577 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 GPR161Q8N6U8 529 aaKnown RBP16.3■□□□□ 0.2
PTCD1-204ENST00000430982 NELL1Q92832 810 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 DHTKD1Q96HY7 919 aaPredicted RBP16.3■□□□□ 0.2
PTCD1-204ENST00000430982 FOXQ1Q9C009 403 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 CLSTN2Q9H4D0 955 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTCD1-204ENST00000430982 FBXO4Q9UKT5 387 aa16.3■□□□□ 0.2
PTCD1-204ENST00000430982 SCN1AP35498 2009 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 GOLGA6L22H0YM25 854 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 C4BPAP04003 597 aaKnown RBP16.29■□□□□ 0.2
PTCD1-204ENST00000430982 BMP6P22004 513 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 CDR1P51861 262 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 TNNC1P63316 161 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 CLDN10P78369 228 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 NTHL1P78549 312 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 FKBP3Q00688 224 aaKnown RBP16.29■□□□□ 0.2
PTCD1-204ENST00000430982 MYL7Q01449 175 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 LRRC63Q05C16 580 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 NCOA4Q13772 614 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 SLC39A12Q504Y0 691 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 RTL10Q7L3V2 364 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 OSTM1Q86WC4 334 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 ZBTB44Q8NCP5 570 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 NELFBQ8WX92 580 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 SYAP1Q96A49 352 aaPredicted RBP16.29■□□□□ 0.2
PTCD1-204ENST00000430982 MMS19Q96T76 1030 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 MKNK1Q9BUB5 465 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 ZCWPW1Q9H0M4 648 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 MMRN2Q9H8L6 949 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 DDX43Q9NXZ2 648 aaKnown RBP16.29■□□□□ 0.2
PTCD1-204ENST00000430982 KIAA1468Q9P260 1216 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 MAFFQ9ULX9 164 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 CTNND2Q9UQB3 1225 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 PCDHGA2Q9Y5H1 932 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 INSL5Q9Y5Q6 135 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 COL4A3Q01955 1670 aa16.29■□□□□ 0.2
PTCD1-204ENST00000430982 MTCL1Q9Y4B5 1905 aaKnown RBP16.29■□□□□ 0.2
PTCD1-204ENST00000430982 MTMR11A4FU01 709 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 PPP1R3GB7ZBB8 358 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 LILRB5O75023 590 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 LRRN2O75325 713 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 VNN2O95498 520 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 TGM1P22735 817 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 ACAT1P24752 427 aaKnown RBP16.28■□□□□ 0.2
PTCD1-204ENST00000430982 ATICP31939 592 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 TSPY1Q01534 308 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 TWF1Q12792 350 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 DUSP4Q13115 394 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 SOWAHAQ2M3V2 549 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 ZNF699Q32M78 642 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 WDR72Q3MJ13 1102 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 C1orf220Q5T0J3 134 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 SV2AQ7L0J3 742 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 GET4Q7L5D6 327 aaPredicted RBP16.28■□□□□ 0.2
PTCD1-204ENST00000430982 DCP1BQ8IZD4 617 aaKnown RBP16.28■□□□□ 0.2
PTCD1-204ENST00000430982 TRIML1Q8N9V2 468 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 ATAD1Q8NBU5 361 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 EPC1Q9H2F5 836 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 HCFC1R1Q9NWW0 138 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 NXF1Q9UBU9 619 aaKnown RBP16.28■□□□□ 0.2
PTCD1-204ENST00000430982 SLC27A5Q9Y2P5 690 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 YIPF1Q9Y548 306 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 NUMBLQ9Y6R0 609 aa16.28■□□□□ 0.2
PTCD1-204ENST00000430982 PRR5-ARHGAP8B1AHC4 643 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 IKBKBO14920 756 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 SLC16A3O15427 465 aaKnown RBP16.27■□□□□ 0.2
PTCD1-204ENST00000430982 VNN1O95497 513 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 POU2F2P09086 479 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 FSHRP23945 695 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 PIK3CAP42336 1068 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 GCLMP48507 274 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 LHX1P48742 406 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 STX17P56962 302 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 ARHGAP8P85298 464 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 ZACNQ401N2 412 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 DPH6Q7L8W6 267 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 LRRTM3Q86VH5 581 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 ELMOD1Q8N336 334 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 SPATA18Q8TC71 538 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 OSBPL6Q9BZF3 934 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 NUP62CLQ9H1M0 184 aa16.27■□□□□ 0.2
PTCD1-204ENST00000430982 DNMT3BQ9UBC3 853 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms