RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 LRGUKQ96M69 825 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 DCLRE1BQ9H816 532 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 ZFATQ9P243 1243 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 KLHL8Q9P2G9 620 aaPredicted RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 NOL3O60936 208 aaKnown RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 RASSF9O75901 435 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 PTPN4P29074 926 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 EFNA5P52803 228 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 NLRP11P59045 1033 aaKnown RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 CCDC33Q8N5R6 958 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 PPP1R36Q96LQ0 422 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 AVENQ9NQS1 362 aaPredicted RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 HOXC10Q9NYD6 342 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 GRHL1Q9NZI5 618 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 STXBP5LQ9Y2K9 1186 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 RPTORQ8N122 1335 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 UNC5CO95185 931 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 GCLCP48506 637 aaPredicted RBP13.22□□□□□ -0.29
CPNE4-201ENST00000429747 MYL6P60660 151 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 CUL3Q13618 768 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 RPS6KA2Q15349 733 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 LACTB2Q53H82 288 aaPredicted RBP13.22□□□□□ -0.29
CPNE4-201ENST00000429747 TEX9Q8N6V9 391 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 ZNF75CPQ92670 426 aaPredicted RBP13.22□□□□□ -0.29
CPNE4-201ENST00000429747 ZBTB10Q96DT7 871 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 TEX13BQ9BXU2 312 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 LRRC4Q9HBW1 653 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 SLC24A2Q9UI40 661 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 CASQ2O14958 399 aaPredicted RBP13.22□□□□□ -0.29
CPNE4-201ENST00000429747 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 PYGBP11216 843 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 SERPINB4P48594 390 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 DCAF12L1Q5VU92 463 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 MAP4K3Q8IVH8 894 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 CEP120Q8N960 986 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 FAM167AQ96KS9 214 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 WDR35Q9P2L0 1181 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 AGAP1Q9UPQ3 857 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.22□□□□□ -0.29
CPNE4-201ENST00000429747 CREB3O43889 395 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 MCL1Q07820 350 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 ZDHHC24Q6UX98 284 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 ZCCHC9Q8N567 271 aaKnown RBP13.22□□□□□ -0.29
CPNE4-201ENST00000429747 MCUQ8NE86 351 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 TEKT4Q8WW24 435 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 TMEM120AQ9BXJ8 343 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 FHDC1Q9C0D6 1143 aaPredicted RBP13.22□□□□□ -0.29
CPNE4-201ENST00000429747 KIAA1683Q9H0B3 1180 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 ZNF408Q9H9D4 720 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 CISHQ9NSE2 258 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
CPNE4-201ENST00000429747 BANF1O75531 89 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 GTF2BQ00403 316 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 CRELD2Q6UXH1 353 aaPredicted RBP13.21□□□□□ -0.29
CPNE4-201ENST00000429747 TRIM56Q9BRZ2 755 aaKnown RBP13.21□□□□□ -0.29
CPNE4-201ENST00000429747 GLIS2Q9BZE0 524 aaPredicted RBP13.21□□□□□ -0.29
CPNE4-201ENST00000429747 FAM49AQ9H0Q0 323 aaPredicted RBP13.21□□□□□ -0.29
CPNE4-201ENST00000429747 RSAD1Q9HA92 442 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 PCDH9Q9HC56 1237 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 INPP5FQ9Y2H2 1132 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 ZC3H4Q9UPT8 1303 aaKnown RBP13.21□□□□□ -0.29
CPNE4-201ENST00000429747 CRYBG1Q9Y4K1 1723 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 MX2P20592 715 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 PTGIRP43119 386 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
CPNE4-201ENST00000429747 AP1B1Q10567 949 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 SLC15A2Q16348 729 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 SH3GL3Q99963 347 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 ZDHHC18Q9NUE0 388 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 ARMCX1Q9P291 453 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 SHOC2Q9UQ13 582 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 SNED1Q8TER0 1413 aa13.21□□□□□ -0.29
CPNE4-201ENST00000429747 IGKV6D-41A0A0C4DH26 115 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 GSTA2P09210 222 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 ZCCHC18P0CG32 403 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 FDX1P10109 184 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 SERPINB3P29508 390 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 TAS2R40P59535 323 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 BMPR2Q13873 1038 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 CDKL3Q8IVW4 592 aaPredicted RBP13.21□□□□□ -0.3
CPNE4-201ENST00000429747 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 RNF169Q8NCN4 708 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 ZSWIM2Q8NEG5 633 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 C2orf40Q9H1Z8 148 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 PAK5Q9P286 719 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 MCM8Q9UJA3 840 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 PGM5Q15124 567 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 HSP90AA5PQ58FG0 334 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 FITM2Q8N6M3 262 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 TMEM161BQ8NDZ6 487 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 CERKQ8TCT0 537 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 SPOCK2Q92563 424 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 AGAP3Q96P47 875 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 SERPINI1Q99574 410 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 TBC1D10AQ9BXI6 508 aa13.21□□□□□ -0.3
CPNE4-201ENST00000429747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.3
CPNE4-201ENST00000429747 H0YGN5 161 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms