RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	DNM1	Q05193	864 aa	Known RBP	19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	FAM26F	Q5R3K3	315 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	LAIR1	Q6GTX8	287 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	PDCL2	Q8N4E4	241 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	CSGALNACT2	Q8N6G5	542 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	SPPL2B	Q8TCT7	592 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	DEPDC1B	Q8WUY9	529 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	MTMR12	Q9C0I1	747 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	HSPBP1	Q9NZL4	362 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	L1RE1	Q9UN81	338 aa		19.08	■□□□□ 0.64
MRPL28-203	ENST00000429738	UBE4B	O95155	1302 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	PTPRJ	Q12913	1337 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	ZNF233	A6NK53	670 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	RET	P07949	1114 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	CASP1	P29466	404 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	VIPR2	P41587	438 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	ME1	P48163	572 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	SPEM2	Q0P670	501 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	LPAL2	Q16609	132 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	MGAT5B	Q3V5L5	792 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	ITIH5	Q86UX2	942 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	CBWD2	Q8IUF1	395 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	MFSD6L	Q8IWD5	586 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	SPATA18	Q8TC71	538 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	SCFD1	Q8WVM8	642 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	SEPT5	Q99719	369 aa	Predicted RBP	19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	LPIN3	Q9BQK8	851 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	TMLHE	Q9NVH6	421 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	INTS13	Q9NVM9	706 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	FAM13B	Q9NYF5	915 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	PIAS3	Q9Y6X2	628 aa		19.07	■□□□□ 0.64
MRPL28-203	ENST00000429738	OBSL1	O75147	1896 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	ARNTL	O00327	626 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	LRP3	O75074	770 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	FGF19	O95750	216 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	ADRB1	P08588	477 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	TMEM191B	P0C7N4	346 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	HAPLN1	P10915	354 aa	Predicted RBP	19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	CXCL12	P48061	93 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	MLLT6	P55198	1093 aa	Predicted RBP	19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	RBP5	P82980	135 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	SURF1	Q15526	300 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	BMT2	Q1RMZ1	405 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	STXBP5	Q5T5C0	1151 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	LIMS2	Q7Z4I7	341 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	DCP1B	Q8IZD4	617 aa	Known RBP	19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	TMEM86A	Q8N2M4	240 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	SPRYD3	Q8NCJ5	442 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	OR5B17	Q8NGF7	314 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	NETO1	Q8TDF5	533 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	LEO1	Q8WVC0	666 aa	Predicted RBP	19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	E2F7	Q96AV8	911 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	RSPRY1	Q96DX4	576 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	ACBD6	Q9BR61	282 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	BLZF1	Q9H2G9	400 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	IL21	Q9HBE4	155 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	KIAA1586	Q9HCI6	787 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	AGPAT3	Q9NRZ7	376 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	RALGAPA1	Q6GYQ0	2036 aa		19.06	■□□□□ 0.64
MRPL28-203	ENST00000429738	PVALEF	A0A1B0GWK0	134 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	HEPACAM2	A8MVW5	462 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	GABRD	O14764	452 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	SLC30A4	O14863	429 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	ZNF263	O14978	683 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	HUS1	O60921	280 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	CHRNB1	P11230	501 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	GABRR2	P28476	465 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	WEE1	P30291	646 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	SNRPF	P62306	86 aa	Known RBP	19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	CUL4B	Q13620	913 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	LMBRD2	Q68DH5	695 aa	Predicted RBP	19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	TOP6BL	Q8N6T0	577 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	NOC3L	Q8WTT2	800 aa	Known RBP	19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	ANKRD36BP1	Q96IX9	119 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	PKMYT1	Q99640	499 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	ATXN3L	Q9H3M9	355 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	SLITRK6	Q9H5Y7	841 aa		19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	ABI2	Q9NYB9	513 aa	Predicted RBP	19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	19.05	■□□□□ 0.64
MRPL28-203	ENST00000429738	SDK1	Q7Z5N4	2213 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	KRT19	P08727	400 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	CDR1	P51861	262 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	TSPY1	Q01534	308 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	SATB1	Q01826	763 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	FCHO2	Q0JRZ9	810 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	BFSP1	Q12934	665 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	VEPH1	Q14D04	833 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	NFE2	Q16621	373 aa	Predicted RBP	19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	SOWAHA	Q2M3V2	549 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	INTS6L	Q5JSJ4	861 aa	Known RBP	19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	PRR23B	Q6ZRT6	265 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	OSTM1	Q86WC4	334 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	WDR49	Q8IV35	697 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	ARID3B	Q8IVW6	561 aa	Predicted RBP	19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	SPEM1	Q8N4L4	309 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	DDX43	Q9NXZ2	648 aa	Known RBP	19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	KIF26A	Q9ULI4	1882 aa	Predicted RBP	19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	ZDHHC9	Q9Y397	364 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	PCDHB5	Q9Y5E4	795 aa		19.04	■□□□□ 0.64
MRPL28-203	ENST00000429738	GTF3C3	Q9Y5Q9	886 aa		19.04	■□□□□ 0.64

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms