RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SLC16A3O15427 465 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TBC1D4O60343 1298 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ASLP04424 464 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 IL32P24001 234 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 WASHC5Q12768 1159 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TCP10Q12799 353 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TMED2Q15363 201 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 RFX4Q33E94 735 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 TTC23LQ6PF05 361 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 DPP8Q6V1X1 898 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 CCDC28AQ8IWP9 274 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 SETD9Q8NE22 299 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 LRRC1Q9BTT6 524 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 KRT84Q9NSB2 600 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 C1orf112Q9NSG2 853 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ISPDA4D126 451 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 FOXO4P98177 505 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 STX5Q13190 355 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 MKRN4PQ13434 485 aaPredicted RBP7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 NDUFAF2Q8N183 169 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 UBE2J2Q8N2K1 259 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 PACRGLQ8N7B6 248 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 ADCY4Q8NFM4 1077 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 HAPLN3Q96S86 360 aa7.85□□□□□ -1.15
SYNPO2-202ENST00000429713 PHF20L1A8MW92 1017 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 PFDN6O15212 129 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF24P17028 368 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 RFC5P40937 340 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 SNAP25P60880 206 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 DYNLL1P63167 89 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 TAP1Q03518 808 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 ADSSL1Q8N142 457 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 AMER2Q8N7J2 671 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 TDRD5Q8NAT2 981 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 ITM2BQ9Y287 266 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 SRGNP10124 158 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 DPYDQ12882 1025 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 DNAAF5Q86Y56 855 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 OXER1Q8TDS5 423 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 PARP4Q9UKK3 1724 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 TYW5A2RUC4 315 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 TRAFD1O14545 582 aaPredicted RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 COPEO14579 308 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 SNX3O60493 162 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 GJB6O95452 261 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 UQCRBP14927 111 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 MAPK4P31152 587 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 POMGNT1Q8WZA1 660 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 NMRK1Q9NWW6 199 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 NWD1Q149M9 1564 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 RHOBTB1O94844 696 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 OXCT1P55809 520 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 RPS8P62241 208 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 S100A12P80511 92 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 TTBK2Q6IQ55 1244 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 OR6Y1Q8NGX8 325 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 MRPL39Q9NYK5 338 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 A0A0G2JND7 137 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 FAM228BP0C875 321 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 CSTF3Q12996 717 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 HABP4Q5JVS0 413 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 HP1BP3Q5SSJ5 553 aaPredicted RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 RINT1Q6NUQ1 792 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 DDX42Q86XP3 938 aaKnown RBP eCLIP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 MICALL2Q8IY33 904 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 VPS33BQ9H267 617 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 PARVAQ9NVD7 372 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 ZNF804BA4D1E1 1349 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 ECE2O60344 883 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 PLA2G4BP0C869 781 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 TMPRSS15P98073 1019 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 AMPD2Q01433 879 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 MEA1Q16626 185 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 GPATCH4Q5T3I0 446 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 LRRC8EQ6NSJ5 796 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 ALKBH5Q6P6C2 394 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 KBTBD8Q8NFY9 601 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 ADAM22Q9P0K1 906 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 COQ6Q9Y2Z9 468 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 TTLL3Q9Y4R7 772 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 PEAK1Q9H792 1746 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 TEX51A0A1B0GUA7 166 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 DLATP10515 647 aaKnown RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 TOP3AQ13472 1001 aaPredicted RBP7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 SQLEQ14534 574 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 CAMK1DQ8IU85 385 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 SVOPQ8N4V2 548 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 C9orf16Q9BUW7 83 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 SUGCTQ9HAC7 445 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 CYP26B1Q9NR63 512 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 ARHGEF3Q9NR81 526 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 SHOC2Q9UQ13 582 aa7.84□□□□□ -1.15
SYNPO2-202ENST00000429713 HTR3EA5X5Y0 456 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 PIK3CAP42336 1068 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 MAPKAPK2P49137 400 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 SCARA3Q6AZY7 606 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 USP17L2Q6R6M4 530 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 ENOSF1Q7L5Y1 443 aa7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 PRMT1Q99873 361 aaKnown RBP7.83□□□□□ -1.16
SYNPO2-202ENST00000429713 TUBA1CQ9BQE3 449 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms