RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 IPCEF1Q8WWN9 437 aaPredicted RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 CEP95Q96GE4 821 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 C17orf80Q9BSJ5 609 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 KCTD5Q9NXV2 234 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 WWOXQ9NZC7 414 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ADA2Q9NZK5 511 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 OGFRQ9NZT2 677 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ATP8A1Q9Y2Q0 1164 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 PBRM1Q86U86 1689 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 SSH2Q76I76 1423 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 SHANK2Q9UPX8 1470 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 M0QYT0 321 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ENTPD3O75355 529 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CHRM3P20309 590 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 IL10P22301 178 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 NEK3P51956 506 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CYP24A1Q07973 514 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 BAATQ14032 418 aaPredicted RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 EPHA7Q15375 998 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 SLC15A2Q16348 729 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 P3H1Q32P28 736 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 IZUMO3Q5VZ72 239 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 LRRC8EQ6NSJ5 796 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 EFL1Q7Z2Z2 1120 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 FGD2Q7Z6J4 655 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 TMEM110Q86TL2 294 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ERO1BQ86YB8 467 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ZNF557Q8N988 423 aaPredicted RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 LSM14AQ8ND56 463 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 GOLPH3LQ9H4A5 285 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CNOT10Q9H9A5 744 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 CYP4F11Q9HBI6 524 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 DNAJC11Q9NVH1 559 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CHMP2BQ9UQN3 213 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ANGPT2O15123 496 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 INPP4BO15327 924 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 RHOBTB1O94844 696 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 MSH3P20585 1137 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 RAB27AP51159 221 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 PMS1P54277 932 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 TEAD4Q15561 434 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 TRIM71Q2Q1W2 868 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 GOLGA7BQ2TAP0 167 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 INAVAQ3KP66 663 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ZNF484Q5JVG2 852 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 C11orf88Q6PI97 169 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CATSPER3Q86XQ3 398 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 KIAA1958Q8N8K9 716 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 MOSPD2Q8NHP6 518 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 PTPRN2Q92932 1015 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 PNKPQ96T60 521 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CGRRF1Q99675 332 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.97□□□□□ -1.45
HERC4-206ENST00000427635 CAPS2Q9BXY5 557 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ZCCHC2Q9C0B9 1178 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 PHACTR1Q9C0D0 580 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 USP44Q9H0E7 712 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ATXN3LQ9H3M9 355 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 NEK6Q9HC98 313 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 TLR8Q9NR97 1041 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 ABI3Q9P2A4 366 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 LIMA1Q9UHB6 759 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 SLC9A3R1O14745 358 aaPredicted RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 TOMM70O94826 608 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 PGK2P07205 417 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 MMEP08473 750 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 RPSAP08865 295 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 PCNAP12004 261 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 UQCRBP14927 111 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 SLC8A1P32418 973 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 TRIM32Q13049 653 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 DGKZQ13574 1117 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ME3Q16798 604 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 SGSM1Q2NKQ1 1148 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 DEPDC1Q5TB30 811 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 LRRC8BQ6P9F7 803 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CCDC149Q6ZUS6 474 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 UNC13DQ70J99 1090 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 HDDC3Q8N4P3 179 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 IL17REQ8NFR9 667 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 SAAL1Q96ER3 474 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 C11orf70Q9BRQ4 267 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 WDR35Q9P2L0 1181 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 STOML1Q9UBI4 398 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 RNF14Q9UBS8 474 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 WARS2Q9UGM6 360 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 CRYL1Q9Y2S2 319 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 PCDHA13Q9Y5I0 950 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CRB1P82279 1406 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ADGRA2Q96PE1 1338 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CYP2D7A0A087X1C5 515 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CCDC195A0A1B0GUA6 201 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CES1P23141 567 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CCNCP24863 283 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 TPP2P29144 1249 aaPredicted RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 ADCY2Q08462 1091 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 NFIAQ12857 509 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 ITGADQ13349 1161 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 SPARCL1Q14515 664 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 UGP2Q16851 508 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms