RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 OASLQ15646 514 aaKnown RBP15.06■□□□□ 0
LIG1-202ENST00000427526 WDR72Q3MJ13 1102 aa15.06■□□□□ 0
LIG1-202ENST00000427526 PPP1R15BQ5SWA1 713 aa15.06■□□□□ 0
LIG1-202ENST00000427526 SPOCD1Q6ZMY3 1216 aa15.06■□□□□ 0
LIG1-202ENST00000427526 NIFKQ9BYG3 293 aaKnown RBP15.06■□□□□ 0
LIG1-202ENST00000427526 TMEM134Q9H6X4 195 aa15.06■□□□□ 0
LIG1-202ENST00000427526 UBN1Q9NPG3 1134 aa15.06■□□□□ 0
LIG1-202ENST00000427526 IGKV6D-21A0A0A0MT36 114 aa15.06■□□□□ 0
LIG1-202ENST00000427526 ASS1P00966 412 aaKnown RBP15.06■□□□□ 0
LIG1-202ENST00000427526 ARSEP51690 589 aa15.06■□□□□ 0
LIG1-202ENST00000427526 IL9RQ01113 521 aa15.06■□□□□ 0
LIG1-202ENST00000427526 FASTKD3Q14CZ7 662 aaKnown RBP15.06■□□□□ 0
LIG1-202ENST00000427526 E2F5Q15329 346 aa15.06■□□□□ 0
LIG1-202ENST00000427526 SEZ6Q53EL9 994 aa15.06■□□□□ 0
LIG1-202ENST00000427526 TXNRD3NBQ6F5E7 133 aa15.06■□□□□ 0
LIG1-202ENST00000427526 TTC25Q96NG3 672 aa15.06■□□□□ 0
LIG1-202ENST00000427526 ZNF408Q9H9D4 720 aa15.06■□□□□ 0
LIG1-202ENST00000427526 EXOC1LA0A1B0GW35 172 aa15.06■□□□□ 0
LIG1-202ENST00000427526 IGF2BP3O00425 579 aaKnown RBP eCLIP15.06■□□□□ 0
LIG1-202ENST00000427526 PRPF4O43172 522 aaKnown RBP eCLIP15.06■□□□□ 01e-6■■■■□ 23.6
LIG1-202ENST00000427526 FAM189A1O60320 539 aa15.06■□□□□ 0
LIG1-202ENST00000427526 CYP2C8P10632 490 aa15.06■□□□□ 0
LIG1-202ENST00000427526 ATF7P17544 494 aaPredicted RBP15.06■□□□□ 0
LIG1-202ENST00000427526 ECHDC2Q86YB7 292 aa15.06■□□□□ 0
LIG1-202ENST00000427526 PITPNM3Q9BZ71 974 aa15.06■□□□□ 0
LIG1-202ENST00000427526 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.06■□□□□ 0
LIG1-202ENST00000427526 hCG_1818297A0A087WSY0 165 aa15.05■□□□□ 0
LIG1-202ENST00000427526 ALOX15BO15296 676 aa15.05■□□□□ 0
LIG1-202ENST00000427526 LSM8O95777 96 aaKnown RBP15.05■□□□□ 0
LIG1-202ENST00000427526 KRT1P04264 644 aa15.05■□□□□ 0
LIG1-202ENST00000427526 CALB1P05937 261 aa15.05■□□□□ 0
LIG1-202ENST00000427526 EZRP15311 586 aaKnown RBP15.05■□□□□ 0
LIG1-202ENST00000427526 CCDC15Q0P6D6 951 aa15.05■□□□□ 0
LIG1-202ENST00000427526 MORF4L2Q15014 288 aa15.05■□□□□ 0
LIG1-202ENST00000427526 RNASEH2BQ5TBB1 312 aaKnown RBP15.05■□□□□ 0
LIG1-202ENST00000427526 WDTC1Q8N5D0 677 aa15.05■□□□□ 0
LIG1-202ENST00000427526 NKD2Q969F2 451 aaPredicted RBP15.05■□□□□ 0
LIG1-202ENST00000427526 MCEEQ96PE7 176 aa15.05■□□□□ 0
LIG1-202ENST00000427526 KLHL14Q9P2G3 628 aa15.05■□□□□ 0
LIG1-202ENST00000427526 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.05■□□□□ 0
LIG1-202ENST00000427526 GLTPD2A6NH11 291 aa15.05■□□□□ -0
LIG1-202ENST00000427526 TTLL13PA6NNM8 815 aa15.05■□□□□ -0
LIG1-202ENST00000427526 SLC25A27O95847 323 aa15.05■□□□□ -0
LIG1-202ENST00000427526 CCNB1P14635 433 aa15.05■□□□□ -0
LIG1-202ENST00000427526 TCF7P36402 384 aaPredicted RBP15.05■□□□□ -0
LIG1-202ENST00000427526 CDKN2BP42772 138 aa15.05■□□□□ -0
LIG1-202ENST00000427526 STAT5BP51692 787 aa15.05■□□□□ -0
LIG1-202ENST00000427526 VCPP55072 806 aaKnown RBP15.05■□□□□ -0
LIG1-202ENST00000427526 GPS1Q13098 491 aa15.05■□□□□ -0
LIG1-202ENST00000427526 TFDP3Q5H9I0 405 aa15.05■□□□□ -0
LIG1-202ENST00000427526 FASTKD5Q7L8L6 764 aaKnown RBP15.05■□□□□ -0
LIG1-202ENST00000427526 SLC7A3Q8WY07 619 aa15.05■□□□□ -0
LIG1-202ENST00000427526 KLHL29Q96CT2 875 aa15.05■□□□□ -0
LIG1-202ENST00000427526 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.05■□□□□ -0
LIG1-202ENST00000427526 A0A0G2JMZ2 1700 aa15.04■□□□□ -0
LIG1-202ENST00000427526 ITGAVP06756 1048 aa15.04■□□□□ -0
LIG1-202ENST00000427526 RGS9BPQ6ZS82 235 aa15.04■□□□□ -0
LIG1-202ENST00000427526 NIPA2Q8N8Q9 360 aa15.04■□□□□ -0
LIG1-202ENST00000427526 MMP19Q99542 508 aa15.04■□□□□ -0
LIG1-202ENST00000427526 STARD13Q9Y3M8 1113 aa15.04■□□□□ -0
LIG1-202ENST00000427526 LOC285556D6RIA3 1793 aa15.04■□□□□ -0
LIG1-202ENST00000427526 SPAG7O75391 227 aa15.04■□□□□ -0
LIG1-202ENST00000427526 KRT16P08779 473 aa15.04■□□□□ -0
LIG1-202ENST00000427526 OSBPP22059 807 aa15.04■□□□□ -0
LIG1-202ENST00000427526 MARK3P27448 753 aa15.04■□□□□ -0
LIG1-202ENST00000427526 TNFSF9P41273 254 aa15.04■□□□□ -0
LIG1-202ENST00000427526 SKIV2L2P42285 1042 aaKnown RBP15.04■□□□□ -0
LIG1-202ENST00000427526 CAPSQ13938 189 aa15.04■□□□□ -0
LIG1-202ENST00000427526 KCTD2Q14681 263 aa15.04■□□□□ -0
LIG1-202ENST00000427526 RASA2Q15283 850 aa15.04■□□□□ -0
LIG1-202ENST00000427526 TARBP2Q15633 366 aaKnown RBP15.04■□□□□ -0
LIG1-202ENST00000427526 HSDL1Q3SXM5 330 aa15.04■□□□□ -0
LIG1-202ENST00000427526 LDLRAD1Q5T700 205 aa15.04■□□□□ -0
LIG1-202ENST00000427526 TRIM50Q86XT4 487 aa15.04■□□□□ -0
LIG1-202ENST00000427526 BRSK2Q8IWQ3 736 aa15.04■□□□□ -0
LIG1-202ENST00000427526 TBC1D31Q96DN5 1066 aa15.04■□□□□ -0
LIG1-202ENST00000427526 ZNF518BQ9C0D4 1074 aa15.04■□□□□ -0
LIG1-202ENST00000427526 EBF2Q9HAK2 575 aa15.04■□□□□ -0
LIG1-202ENST00000427526 C3orf70A6NLC5 250 aaPredicted RBP15.03■□□□□ -0
LIG1-202ENST00000427526 ADCY3O60266 1144 aa15.03■□□□□ -0
LIG1-202ENST00000427526 TGFB3P10600 412 aa15.03■□□□□ -0
LIG1-202ENST00000427526 CDH5P33151 784 aaPredicted RBP15.03■□□□□ -0
LIG1-202ENST00000427526 AP3M2P53677 418 aa15.03■□□□□ -0
LIG1-202ENST00000427526 GRM1Q13255 1194 aa15.03■□□□□ -0
LIG1-202ENST00000427526 PIGHQ14442 188 aaPredicted RBP15.03■□□□□ -0
LIG1-202ENST00000427526 PKN2Q16513 984 aaKnown RBP15.03■□□□□ -0
LIG1-202ENST00000427526 HP1BP3Q5SSJ5 553 aaPredicted RBP15.03■□□□□ -0
LIG1-202ENST00000427526 DNAJC24Q6P3W2 148 aa15.03■□□□□ -0
LIG1-202ENST00000427526 TLDC1Q6P9B6 456 aa15.03■□□□□ -0
LIG1-202ENST00000427526 METTL7BQ6UX53 244 aa15.03■□□□□ -0
LIG1-202ENST00000427526 WDR49Q8IV35 697 aa15.03■□□□□ -0
LIG1-202ENST00000427526 FBXO16Q8IX29 292 aaPredicted RBP15.03■□□□□ -0
LIG1-202ENST00000427526 SEPT1Q8WYJ6 367 aa15.03■□□□□ -0
LIG1-202ENST00000427526 SLC10A4Q96EP9 437 aa15.03■□□□□ -0
LIG1-202ENST00000427526 GRID1Q9ULK0 1009 aa15.03■□□□□ -0
LIG1-202ENST00000427526 CLEC11AQ9Y240 323 aa15.03■□□□□ -0
LIG1-202ENST00000427526 GPR162Q16538 588 aa15.03■□□□□ -0
LIG1-202ENST00000427526 ZFYVE27Q5T4F4 411 aa15.03■□□□□ -0
LIG1-202ENST00000427526 MAP1SQ66K74 1059 aaPredicted RBP15.03■□□□□ -0
LIG1-202ENST00000427526 ZPBP2Q6X784 338 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms