RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 A8MXQ7 604 aa26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 LRRN2O75325 713 aa26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 ALDH1A3P47895 512 aa26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 CETN1Q12798 172 aa26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 IRF2BP1Q8IU81 584 aa26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 RPGRIP1Q96KN7 1286 aa26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 SEPT5Q99719 369 aaPredicted RBP26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 COL25A1Q9BXS0 654 aaPredicted RBP26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 CYP3A43Q9HB55 503 aa26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 CRTAC1Q9NQ79 661 aa26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 USTQ9Y2C2 406 aa26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 LOC730098B7Z3J9 87 aa26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 ATP2C2O75185 946 aa26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 AFPP02771 609 aaKnown RBP26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 CDR1P51861 262 aa26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 KCNH2Q12809 1159 aa26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 CCDC142Q17RM4 750 aa26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 MGAT5BQ3V5L5 792 aa26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 CFAP221Q4G0U5 840 aa26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 C4orf50Q6ZRC1 276 aa26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 GJD3Q8N144 294 aa26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 FUBP3Q96I24 572 aaKnown RBP eCLIP26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 HCFC1R1Q9NWW0 138 aa26.84■■□□□ 1.89
HERPUD2-205ENST00000427455 CUL9Q8IWT3 2517 aa26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 HAPLN1P10915 354 aaPredicted RBP26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 SSTR3P32745 418 aaPredicted RBP26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 EPHB3P54753 998 aa26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 TYRO3Q06418 890 aa26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 INCA1Q0VD86 236 aa26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 PABPC1LQ4VXU2 614 aaKnown RBP26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 IQCEQ6IPM2 695 aa26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 C11orf57Q6ZUT1 292 aaPredicted RBP26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 SPATA2LQ8IUW3 424 aaPredicted RBP26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 TDRD5Q8NAT2 981 aaKnown RBP26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 B3GALNT2Q8NCR0 500 aa26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 MYCBPAPQ8TBZ2 947 aa26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 ENOX1Q8TC92 643 aaKnown RBP26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 MYLPFQ96A32 169 aa26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 DPEP3Q9H4B8 488 aa26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 CEP72Q9P209 647 aa26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 DNMT3BQ9UBC3 853 aaKnown RBP26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 MAGEC2Q9UBF1 373 aaPredicted RBP26.83■■□□□ 1.89
HERPUD2-205ENST00000427455 SOAT2O75908 522 aa26.82■■□□□ 1.88
HERPUD2-205ENST00000427455 PTPN2P17706 415 aa26.82■■□□□ 1.88
HERPUD2-205ENST00000427455 PTPN1P18031 435 aaKnown RBP26.82■■□□□ 1.88
HERPUD2-205ENST00000427455 SP100P23497 879 aaPredicted RBP26.82■■□□□ 1.88
HERPUD2-205ENST00000427455 MDH1BQ5I0G3 518 aa26.82■■□□□ 1.88
HERPUD2-205ENST00000427455 OTOP3Q7RTS5 596 aa26.82■■□□□ 1.88
HERPUD2-205ENST00000427455 UNC93AQ86WB7 457 aa26.82■■□□□ 1.88
HERPUD2-205ENST00000427455 CREBRFQ8IUR6 639 aa26.82■■□□□ 1.88
HERPUD2-205ENST00000427455 TNIP3Q96KP6 325 aa26.82■■□□□ 1.88
HERPUD2-205ENST00000427455 ZNF512Q96ME7 567 aaPredicted RBP26.82■■□□□ 1.88
HERPUD2-205ENST00000427455 RHOP08100 348 aa26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 FSHRP23945 695 aa26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 MTIF2P46199 727 aaKnown RBP26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 NDST1P52848 882 aa26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 NTHL1P78549 312 aa26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 GET4Q7L5D6 327 aaPredicted RBP26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 ACSF2Q96CM8 615 aaPredicted RBP26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 PCED1BQ96HM7 432 aa26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 CORO1BQ9BR76 489 aa26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 DNAJC25Q9H1X3 360 aa26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 FAM124BQ9H5Z6 455 aaPredicted RBP26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 AVENQ9NQS1 362 aaPredicted RBP26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 NFE2L3Q9Y4A8 694 aa26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 ASB3Q9Y575 518 aa26.81■■□□□ 1.88
HERPUD2-205ENST00000427455 MUC3AQ02505 3323 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 C2CD4DB7Z1M9 353 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 ATF6P18850 670 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 MAGEA11P43364 429 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 CYP27A1Q02318 531 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 VEPH1Q14D04 833 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 ITIH5Q86UX2 942 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 TTC39CQ8N584 583 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 LEMD2Q8NC56 503 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 CD320Q9NPF0 282 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 ASAH2Q9NR71 780 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 HMGXB4Q9UGU5 601 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 PTPRDP23468 1912 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 DOCK6Q96HP0 2047 aa26.8■■□□□ 1.88
HERPUD2-205ENST00000427455 LETM1O95202 739 aaPredicted RBP26.79■■□□□ 1.88
HERPUD2-205ENST00000427455 CD58P19256 250 aa26.79■■□□□ 1.88
HERPUD2-205ENST00000427455 TRIM21P19474 475 aaKnown RBP26.79■■□□□ 1.88
HERPUD2-205ENST00000427455 CYP2F1P24903 491 aa26.79■■□□□ 1.88
HERPUD2-205ENST00000427455 RPL10AP62906 217 aaKnown RBP26.79■■□□□ 1.88
HERPUD2-205ENST00000427455 TATDN2Q93075 761 aa26.79■■□□□ 1.88
HERPUD2-205ENST00000427455 PSMG2Q969U7 264 aa26.79■■□□□ 1.88
HERPUD2-205ENST00000427455 SAMSN1Q9NSI8 373 aaKnown RBP26.79■■□□□ 1.88
HERPUD2-205ENST00000427455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.79■■□□□ 1.88
HERPUD2-205ENST00000427455 NOTCH4Q99466 2003 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 CILPO75339 1184 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 EPHA5P54756 1037 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 MYL5Q02045 173 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 CUL2Q13617 745 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 MAN2A1Q16706 1144 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 SKOR2Q2VWA4 1001 aaPredicted RBP26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 HSP90AA4PQ58FG1 418 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 VSTM1Q6UX27 236 aa26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 PDZD4Q76G19 769 aaPredicted RBP26.78■■□□□ 1.88
HERPUD2-205ENST00000427455 ACOT1Q86TX2 421 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms