RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 TAF4BQ92750 862 aa16.42■□□□□ 0.22
PHF1-203ENST00000427004 CYP4F11Q9HBI6 524 aa16.42■□□□□ 0.22
PHF1-203ENST00000427004 CISHQ9NSE2 258 aa16.42■□□□□ 0.22
PHF1-203ENST00000427004 FAM207AQ9NSI2 230 aaPredicted RBP16.42■□□□□ 0.22
PHF1-203ENST00000427004 HCFC1R1Q9NWW0 138 aa16.42■□□□□ 0.22
PHF1-203ENST00000427004 IFNKQ9P0W0 207 aa16.42■□□□□ 0.22
PHF1-203ENST00000427004 FBXW11Q9UKB1 542 aa16.42■□□□□ 0.22
PHF1-203ENST00000427004 SIK3Q9Y2K2 1263 aa16.42■□□□□ 0.22
PHF1-203ENST00000427004 PCDHB4Q9Y5E5 795 aa16.42■□□□□ 0.22
PHF1-203ENST00000427004 VCANP13611 3396 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 CARNS1A5YM72 827 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 P4HA2O15460 535 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 CILPO75339 1184 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 ABLIM3O94929 683 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 SERPINC1P01008 464 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 PTPN1P18031 435 aaKnown RBP16.41■□□□□ 0.22
PHF1-203ENST00000427004 CYP2F1P24903 491 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 ADORA2BP29275 332 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 PLCB2Q00722 1185 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 PDE12Q6L8Q7 609 aaKnown RBP16.41■□□□□ 0.22
PHF1-203ENST00000427004 TMEM86AQ8N2M4 240 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 CCDC150Q8NCX0 1101 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 GIPC2Q8TF65 315 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 JAKMIP2Q96AA8 810 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 PCMTD1Q96MG8 357 aaPredicted RBP16.41■□□□□ 0.22
PHF1-203ENST00000427004 SEPT5Q99719 369 aaPredicted RBP16.41■□□□□ 0.22
PHF1-203ENST00000427004 ZSWIM1Q9BR11 485 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 B3GNT5Q9BYG0 378 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 ZNF518BQ9C0D4 1074 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 GANQ9H2C0 597 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 UBE2ZQ9H832 354 aaPredicted RBP16.41■□□□□ 0.22
PHF1-203ENST00000427004 NLRC4Q9NPP4 1024 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
PHF1-203ENST00000427004 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.41■□□□□ 0.22
PHF1-203ENST00000427004 DNAJC12Q9UKB3 198 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 DSEQ9UL01 958 aa16.41■□□□□ 0.22
PHF1-203ENST00000427004 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.41■□□□□ 0.22
PHF1-203ENST00000427004 OR6C75A6NL08 312 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 SPDYE4A6NLX3 237 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 PMM2O15305 246 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 C8AP07357 584 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 CFHP08603 1231 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 SP100P23497 879 aaPredicted RBP16.4■□□□□ 0.22
PHF1-203ENST00000427004 BDNFP23560 247 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 USP8P40818 1118 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 LHX1P48742 406 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 RAD23BP54727 409 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 CYP27A1Q02318 531 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 MTMR3Q13615 1198 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 BMS1Q14692 1282 aaKnown RBP16.4■□□□□ 0.22
PHF1-203ENST00000427004 DDR2Q16832 855 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 CTC1Q2NKJ3 1217 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 ANKRD54Q6NXT1 300 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 TMEM270Q6UE05 265 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 PAQR9Q6ZVX9 377 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 SLC4A11Q8NBS3 891 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 PCED1BQ96HM7 432 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 XPO4Q9C0E2 1151 aaKnown RBP16.4■□□□□ 0.22
PHF1-203ENST00000427004 GPR88Q9GZN0 384 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 SSX2IPQ9Y2D8 614 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 GREB1Q4ZG55 1949 aa16.4■□□□□ 0.22
PHF1-203ENST00000427004 NCOR1O75376 2440 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 A0A1B0GTH6 734 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 GRXCR2A6NFK2 248 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 BEST1O76090 585 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 KRT5P13647 590 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 ATF6P18850 670 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 BRD2P25440 801 aaKnown RBP16.39■□□□□ 0.21
PHF1-203ENST00000427004 KCNQ1P51787 676 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 TSPY1Q01534 308 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 GOLGA8FQ08AF8 430 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 GOLGA8DPQ0D2H9 430 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 INCA1Q0VD86 236 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 GPR17Q13304 367 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 RAPGEF1Q13905 1077 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 SCN4BQ8IWT1 228 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 HS6ST3Q8IZP7 471 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 RBBP8NLQ8NC74 664 aaPredicted RBP16.39■□□□□ 0.21
PHF1-203ENST00000427004 B3GALNT2Q8NCR0 500 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 ZNF461Q8TAF7 563 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 TFAP2BQ92481 460 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 ZNF707Q96C28 371 aaPredicted RBP16.39■□□□□ 0.21
PHF1-203ENST00000427004 PABPC5Q96DU9 382 aaKnown RBP16.39■□□□□ 0.21
PHF1-203ENST00000427004 ACBD6Q9BR61 282 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 APEX2Q9UBZ4 518 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 CDH9Q9ULB4 789 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 YIPF1Q9Y548 306 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 MYO16Q9Y6X6 1858 aa16.39■□□□□ 0.21
PHF1-203ENST00000427004 OBSL1O75147 1896 aa16.38■□□□□ 0.21
PHF1-203ENST00000427004 LRRC10BA6NIK2 292 aa16.38■□□□□ 0.21
PHF1-203ENST00000427004 PRRG1O14668 218 aa16.38■□□□□ 0.21
PHF1-203ENST00000427004 P4HA1P13674 534 aa16.38■□□□□ 0.21
PHF1-203ENST00000427004 POLR2FP61218 127 aaKnown RBP16.38■□□□□ 0.21
PHF1-203ENST00000427004 TWF1Q12792 350 aa16.38■□□□□ 0.21
PHF1-203ENST00000427004 CETN1Q12798 172 aa16.38■□□□□ 0.21
PHF1-203ENST00000427004 MGAT5BQ3V5L5 792 aa16.38■□□□□ 0.21
PHF1-203ENST00000427004 FKBP15Q5T1M5 1219 aa16.38■□□□□ 0.21
PHF1-203ENST00000427004 PPP1R26Q5T8A7 1209 aaPredicted RBP16.38■□□□□ 0.21
PHF1-203ENST00000427004 FAM171BQ6P995 826 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms