RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PDCLQ13371 301 aa16.09■□□□□ 0.17
ACTB-204ENST00000425660 GLE1Q53GS7 698 aaKnown RBP16.09■□□□□ 0.17
ACTB-204ENST00000425660 ARHGAP17Q68EM7 881 aa16.09■□□□□ 0.17
ACTB-204ENST00000425660 PHLDB2Q86SQ0 1253 aa16.09■□□□□ 0.17
ACTB-204ENST00000425660 OR6B3Q8NGW1 331 aa16.09■□□□□ 0.17
ACTB-204ENST00000425660 RNPC3Q96LT9 517 aaKnown RBP16.09■□□□□ 0.17
ACTB-204ENST00000425660 ARGLU1Q9NWB6 273 aaPredicted RBP16.09■□□□□ 0.17
ACTB-204ENST00000425660 A8MXQ7 604 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 HUS1O60921 280 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 FGFR1P11362 822 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 WARSP23381 471 aaKnown RBP16.08■□□□□ 0.17
ACTB-204ENST00000425660 GNL1P36915 607 aaPredicted RBP16.08■□□□□ 0.17
ACTB-204ENST00000425660 MARCKSL1P49006 195 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 AARSP49588 968 aaKnown RBP eCLIP16.08■□□□□ 0.176e-51■□□□□ 10.8
ACTB-204ENST00000425660 SCNN1GP51170 649 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 RPL7AP62424 266 aaKnown RBP16.08■□□□□ 0.17
ACTB-204ENST00000425660 RBM10P98175 930 aaKnown RBP16.08■□□□□ 0.17
ACTB-204ENST00000425660 PPP1R26Q5T8A7 1209 aaPredicted RBP16.08■□□□□ 0.17
ACTB-204ENST00000425660 DNAJC24Q6P3W2 148 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 FAM43BQ6ZT52 329 aaPredicted RBP16.08■□□□□ 0.17
ACTB-204ENST00000425660 MTERF4Q7Z6M4 381 aaKnown RBP16.08■□□□□ 0.17
ACTB-204ENST00000425660 ACOT1Q86TX2 421 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 ECHDC2Q86YB7 292 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 CPNE8Q86YQ8 564 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 PDCL2Q8N4E4 241 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.08■□□□□ 0.17
ACTB-204ENST00000425660 RUBCNQ92622 972 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 C18orf8Q96DM3 657 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 IP6K2Q9UHH9 426 aa16.08■□□□□ 0.17
ACTB-204ENST00000425660 C9IYK1 514 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 GABRDO14764 452 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 CAPN15O75808 1086 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 PFKMP08237 780 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 CLCN6P51797 869 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 CLCNKBP51801 687 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 ZNF268Q14587 947 aaPredicted RBP16.08■□□□□ 0.16
ACTB-204ENST00000425660 BRD3Q15059 726 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 MTFR1Q15390 333 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 UPP1Q16831 310 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 LRRC8DQ7L1W4 858 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 XYLT1Q86Y38 959 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 ADGRF2Q8IZF7 708 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 FNIP1Q8TF40 1166 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 DEFB118Q96PH6 123 aa16.08■□□□□ 0.16
ACTB-204ENST00000425660 NAP1L3Q99457 506 aaPredicted RBP16.08■□□□□ 0.16
ACTB-204ENST00000425660 SIGLEC16A6NMB1 481 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 CCDC188H7C350 402 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 PITPNM1O00562 1244 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 PODXLO00592 558 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 EOMESO95936 686 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 FGGP02679 453 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 ERBB2P04626 1255 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 SETSIPP0DME0 302 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 SELPP16109 830 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 LMO2P25791 158 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 RWDD2BP57060 319 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 RNASE9P60153 205 aaKnown RBP16.07■□□□□ 0.16
ACTB-204ENST00000425660 FAM189BP81408 668 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 GRIK3Q13003 919 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 CYP4A22Q5TCH4 519 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 CCDC70Q6NSX1 233 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 SLC24A5Q71RS6 500 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 RTN4RL1Q86UN2 441 aaPredicted RBP16.07■□□□□ 0.16
ACTB-204ENST00000425660 NIPA2Q8N8Q9 360 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 STK32AQ8WU08 396 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 HNRNPLLQ8WVV9 542 aaKnown RBP16.07■□□□□ 0.16
ACTB-204ENST00000425660 MCRS1Q96EZ8 462 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 MCEEQ96PE7 176 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 LRRC1Q9BTT6 524 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 FTHL17Q9BXU8 183 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 DNAI2Q9GZS0 605 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 MIS12Q9H081 205 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 DPEP3Q9H4B8 488 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 TJP2Q9UDY2 1190 aa16.07■□□□□ 0.16
ACTB-204ENST00000425660 PSTPIP1O43586 416 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 CCL5P13501 91 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 PAX3P23760 479 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 MCM3P25205 808 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 VSNL1P62760 191 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 ZNF252P-AS1Q0IIN9 211 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 BFSP2Q13515 415 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 GOLGA7BQ2TAP0 167 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 TTC30AQ86WT1 665 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 C3orf58Q8NDZ4 430 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 SLC35F5Q8WV83 523 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 LINC01599Q8WXQ3 324 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 TNIP3Q96KP6 325 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 SNX25Q9H3E2 840 aa16.06■□□□□ 0.16
ACTB-204ENST00000425660 CYB561D2O14569 222 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 GJB6O95452 261 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 MYCP01106 439 aaPredicted RBP16.05■□□□□ 0.16
ACTB-204ENST00000425660 PYGMP11217 842 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 KRT3P12035 628 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 IGFBP6P24592 240 aaPredicted RBP16.05■□□□□ 0.16
ACTB-204ENST00000425660 PSMC1P62191 440 aaKnown RBP16.05■□□□□ 0.16
ACTB-204ENST00000425660 PIGHQ14442 188 aaPredicted RBP16.05■□□□□ 0.16
ACTB-204ENST00000425660 DCUN1D2Q6PH85 259 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 TMEM86AQ8N2M4 240 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 UBA3Q8TBC4 463 aa16.05■□□□□ 0.16
ACTB-204ENST00000425660 DDX27Q96GQ7 796 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms