RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 KLHL33A6NCF5 533 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 ZNF213O14771 459 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 PPM1DO15297 605 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 JTBO76095 146 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 TOP3BO95985 862 aaKnown RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 MYBP10242 640 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 ALAS1P13196 640 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 EPHB2P29323 1055 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 PRDX5P30044 214 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 CLCN2P51788 898 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 ZNF135P52742 658 aaPredicted RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 EXOSC9Q06265 439 aaKnown RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 ZNF260Q3ZCT1 412 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 ZNF628Q5EBL2 1059 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 SLC4A10Q6U841 1118 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 ZNF66Q6ZN08 573 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 MIGA2Q7L4E1 593 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 MAVSQ7Z434 540 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 FAM90A1Q86YD7 464 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 RASAL3Q86YV0 1011 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 FAM9AQ8IZU1 332 aaPredicted RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.72□□□□□ -2.13
PMS1-210ENST00000424307 PCSK9Q8NBP7 692 aaKnown RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 PSD4Q8NDX1 1056 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 HDAC10Q969S8 669 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 THOC3Q96J01 351 aaKnown RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 CAMKK2Q96RR4 588 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 TRIB1Q96RU8 372 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 GTPBP4Q9BZE4 634 aaKnown RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 PUS7LQ9H0K6 701 aaKnown RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 MANSC1Q9H8J5 431 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 INTS13Q9NVM9 706 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 ICKQ9UPZ9 632 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 CCDC195A0A1B0GUA6 201 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 DCLK1O15075 740 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 VNN1O95497 513 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 ALDH2P05091 517 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 GJB1P08034 283 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 HDCP19113 662 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 SFPQP23246 707 aaKnown RBP eCLIP1.72□□□□□ -2.13
PMS1-210ENST00000424307 LIPAP38571 399 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 FPGSQ05932 587 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 ERV3-1Q14264 604 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 ZNF267Q14586 743 aaPredicted RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 PLAC9Q5JTB6 97 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 RBM20Q5T481 1227 aaKnown RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 CEP85Q6P2H3 762 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 PPP1R32Q7Z5V6 425 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 NECAB2Q7Z6G3 386 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 SNX19Q92543 992 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 TNPO1Q92973 898 aaKnown RBP1.72□□□□□ -2.13
PMS1-210ENST00000424307 PRSS22Q9GZN4 317 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 SPC25Q9HBM1 224 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 ABCF2Q9UG63 623 aa1.72□□□□□ -2.13
PMS1-210ENST00000424307 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.13
PMS1-210ENST00000424307 POLRMTO00411 1230 aaKnown RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 DNAJB5O75953 348 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 NPTX2P47972 431 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 ANXA11P50995 505 aaKnown RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 MAP2K6P52564 334 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 RPS7P62081 194 aaKnown RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 PREPLQ4J6C6 727 aaPredicted RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 SLC18B1Q6NT16 456 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 ZNF804AQ7Z570 1209 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 YTHDF3Q7Z739 585 aaKnown RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 CLNKQ7Z7G1 428 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 ZNF280BQ86YH2 543 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 RAVER1Q8IY67 606 aaKnown RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 DNAJC5GQ8N7S2 189 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.71□□□□□ -2.14
PMS1-210ENST00000424307 C16orf52Q8NHV5 167 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 POC1BQ8TC44 478 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 STAG1Q8WVM7 1258 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 NR4A3Q92570 626 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 REPS1Q96D71 796 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 PACSIN1Q9BY11 444 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 ACTRT3Q9BYD9 372 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 TINAGL1Q9GZM7 467 aaPredicted RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 MCM8Q9UJA3 840 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 SSX2IPQ9Y2D8 614 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 PCDHA1Q9Y5I3 950 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 SHTN1A0MZ66 631 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 hCG_1984214I3L0E3 225 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 M0QYG6 137 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 SGTAO43765 313 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 EBLN1P0CF75 366 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 NR2F6P10588 404 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 PDCP20941 246 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 DRD4P21917 467 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 NDUFV1P49821 464 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 NOGQ13253 232 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 GTF2H3Q13889 308 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 HABP2Q14520 560 aaPredicted RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 ZIK1Q3SY52 487 aaPredicted RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 BRDTQ58F21 947 aaPredicted RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 C9orf50Q5SZB4 431 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 PNMA8AQ86V59 439 aaPredicted RBP1.71□□□□□ -2.14
PMS1-210ENST00000424307 GALNT16Q8N428 558 aa1.71□□□□□ -2.14
PMS1-210ENST00000424307 FAM109AQ8N4B1 249 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms