RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 AAK1Q2M2I8 961 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 BMP2KLQ5H9B9 411 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 IQSEC1Q6DN90 963 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 MFSD5Q6N075 450 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 MAMDC4Q6UXC1 1216 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 RNF207Q6ZRF8 634 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 ZNF365Q70YC5 407 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 OTOP3Q7RTS5 596 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 ANKRD33Q7Z3H0 272 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 TBC1D10CQ8IV04 446 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 ENAHQ8N8S7 591 aaPredicted RBP6.48□□□□□ -1.37
LINC00458-201ENST00000423442 UBA5Q9GZZ9 404 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 MAF1Q9H063 256 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 SLC28A3Q9HAS3 691 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 GPR27Q9NS67 375 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 KCND1Q9NSA2 647 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 ARHGAP20Q9P2F6 1191 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 MSRAQ9UJ68 235 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 TBX21Q9UL17 535 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 MRPL11Q9Y3B7 192 aaKnown RBP6.48□□□□□ -1.37
LINC00458-201ENST00000423442 TELO2Q9Y4R8 837 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 NEDD4P46934 1319 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 MCM3APO60318 1980 aa6.48□□□□□ -1.37
LINC00458-201ENST00000423442 LOC102724159A0A0B4J2E5 919 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 DUSP11O75319 330 aaKnown RBP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 SNAI1O95863 264 aaPredicted RBP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 CYP21A2P08686 494 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 C6orf222P0C671 652 aaPredicted RBP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 CALM1P0DP23 149 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 CALM2P0DP24 149 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 CALM3P0DP25 149 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 KIF5BP33176 963 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 MRE11P49959 708 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 ACLYP53396 1101 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 PFKPQ01813 784 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 TNFAIP2Q03169 654 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 MAP4K2Q12851 820 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 PPIGQ13427 754 aaKnown RBP eCLIP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 BAATQ14032 418 aaPredicted RBP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 PWP2Q15269 919 aaKnown RBP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 RAB30Q15771 203 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 CCDC144BQ3MJ40 725 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 USH1GQ495M9 461 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 NRN1LQ496H8 165 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 ARMCX2Q7L311 632 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 ADGRF4Q8IZF3 695 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 CTCFLQ8NI51 663 aaPredicted RBP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 NEIL1Q96FI4 390 aaPredicted RBP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 IER2Q9BTL4 223 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 PHF20Q9BVI0 1012 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 AMNQ9BXJ7 453 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 KATNBL1Q9H079 304 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 RANBP17Q9H2T7 1088 aaKnown RBP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 CCSER2Q9H7U1 834 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 A1CFQ9NQ94 594 aaKnown RBP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 STARD7Q9NQZ5 370 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 CYP39A1Q9NYL5 469 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 RBM8AQ9Y5S9 174 aaKnown RBP6.47□□□□□ -1.37
LINC00458-201ENST00000423442 LRRC37A2A6NM11 1700 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 ABCB11O95342 1321 aa6.47□□□□□ -1.37
LINC00458-201ENST00000423442 MUC6Q6W4X9 2439 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 TRANK1O15050 2925 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 NKRFO15226 690 aaKnown RBP eCLIP6.46□□□□□ -1.38
LINC00458-201ENST00000423442 DLX3O60479 287 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 EIF5BO60841 1220 aaKnown RBP6.46□□□□□ -1.38
LINC00458-201ENST00000423442 CDC45O75419 566 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 REC8O95072 547 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 IL18BPO95998 194 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 HMGB1P09429 215 aaKnown RBP6.46□□□□□ -1.38
LINC00458-201ENST00000423442 ETFBP38117 255 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 GNAQP50148 359 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 RABGGTBP53611 331 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 KRT32Q14532 448 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 SLC10A6Q3KNW5 377 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 USP39Q53GS9 565 aaKnown RBP6.46□□□□□ -1.38
LINC00458-201ENST00000423442 MUM1L1Q5H9M0 696 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 MIIPQ5JXC2 388 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 CD276Q5ZPR3 534 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 PSRC1Q6PGN9 363 aaPredicted RBP6.46□□□□□ -1.38
LINC00458-201ENST00000423442 USP53Q70EK8 1073 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 EEPD1Q7L9B9 569 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 CHST3Q7LGC8 479 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 FUKQ8N0W3 1084 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 TMEM199Q8N511 208 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 SAMD3Q8N6K7 520 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 FAM133AQ8N9E0 248 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 NSUN6Q8TEA1 469 aaKnown RBP6.46□□□□□ -1.38
LINC00458-201ENST00000423442 KCTD13Q8WZ19 329 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 HERVK_113Q902F9 699 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 EXTL1Q92935 676 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 RRP36Q96EU6 259 aaKnown RBP6.46□□□□□ -1.38
LINC00458-201ENST00000423442 ZNF503Q96F45 646 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 GLT1D1Q96MS3 346 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 KCNJ15Q99712 375 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 LZTS2Q9BRK4 669 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 MAP3K20Q9NYL2 800 aaKnown RBP6.46□□□□□ -1.38
LINC00458-201ENST00000423442 SEC63Q9UGP8 760 aaKnown RBP6.46□□□□□ -1.38
LINC00458-201ENST00000423442 BAZ2BQ9UIF8 2168 aaKnown RBP6.46□□□□□ -1.38
LINC00458-201ENST00000423442 PCDHA1Q9Y5I3 950 aa6.46□□□□□ -1.38
LINC00458-201ENST00000423442 PIEZO1Q92508 2521 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms