RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 RDXP35241 583 aaKnown RBP14.06□□□□□ -0.16
MCF2L-213ENST00000421756 TUBB8Q3ZCM7 444 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.06□□□□□ -0.16
MCF2L-213ENST00000421756 NDRG1Q92597 394 aaKnown RBP14.06□□□□□ -0.16
MCF2L-213ENST00000421756 L3MBTL1Q9Y468 752 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 SCINQ9Y6U3 715 aa14.06□□□□□ -0.16
MCF2L-213ENST00000421756 MKI67P46013 3256 aaKnown RBP14.05□□□□□ -0.16
MCF2L-213ENST00000421756 EVPLQ92817 2033 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 CDH6P55285 790 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 YWHAGP61981 247 aaKnown RBP eCLIP14.05□□□□□ -0.16
MCF2L-213ENST00000421756 KCNJ2P63252 427 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 VSTM1Q6UX27 236 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 METTL7BQ6UX53 244 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 BRSK2Q8IWQ3 736 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 CCDC63Q8NA47 563 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 RDM1Q8NG50 284 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-213ENST00000421756 AFG1LQ8WV93 481 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 MAK16Q9BXY0 300 aaKnown RBP14.05□□□□□ -0.16
MCF2L-213ENST00000421756 MAP3K20Q9NYL2 800 aaKnown RBP14.05□□□□□ -0.16
MCF2L-213ENST00000421756 H0YCG3 227 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 FZD9O00144 591 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 STAG3L1P0CL83 205 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 TBXAS1P24557 533 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-213ENST00000421756 CDC25CP30307 473 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 ADCYAP1R1P41586 468 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 ATXN1P54253 815 aaKnown RBP14.05□□□□□ -0.16
MCF2L-213ENST00000421756 YARSP54577 528 aaKnown RBP14.05□□□□□ -0.16
MCF2L-213ENST00000421756 CCDC142Q17RM4 750 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 PRAMEF19Q5SWL8 479 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 SCUBE3Q8IX30 993 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 PALM2Q8IXS6 379 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 PGM2Q96G03 612 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 CFAP36Q96G28 342 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 SDCBP2Q9H190 292 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 SNX9Q9Y5X1 595 aa14.05□□□□□ -0.16
MCF2L-213ENST00000421756 TMEM191CA6NGB0 347 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 CCT8L1PA6NM43 557 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 SLC1A1P43005 524 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 CTCFP49711 727 aaPredicted RBP14.04□□□□□ -0.16
MCF2L-213ENST00000421756 HADHBP55084 474 aaKnown RBP14.04□□□□□ -0.16
MCF2L-213ENST00000421756 RNASELQ05823 741 aaKnown RBP14.04□□□□□ -0.16
MCF2L-213ENST00000421756 ICE2Q659A1 982 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 DARS2Q6PI48 645 aaKnown RBP14.04□□□□□ -0.16
MCF2L-213ENST00000421756 ACOT1Q86TX2 421 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 UNC45BQ8IWX7 931 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 PYROXD1Q8WU10 500 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 CFAP57Q96MR6 1250 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 ADPGKQ9BRR6 497 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 PITPNM3Q9BZ71 974 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 CDT1Q9H211 546 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.04□□□□□ -0.163e-6■■■■□ 20.4
MCF2L-213ENST00000421756 MAPK13O15264 365 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 DRG2P55039 364 aaKnown RBP14.04□□□□□ -0.16
MCF2L-213ENST00000421756 GRM1Q13255 1194 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 SGSM1Q2NKQ1 1148 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 PPP1R21Q6ZMI0 780 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 TRIM11Q96F44 468 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 GPR20Q99678 358 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.04□□□□□ -0.167e-7■■■■□ 21.4
MCF2L-213ENST00000421756 PPEF2O14830 753 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 LIASO43766 372 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 ERBB2P04626 1255 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 ADORA2BP29275 332 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 MSS51Q4VC12 460 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 PLEKHA7Q6IQ23 1121 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 C3orf62Q6ZUJ4 267 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 C1orf127Q8N9H9 656 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 MORC4Q8TE76 937 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 RMDN2Q96LZ7 410 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 ZNF317Q96PQ6 595 aaPredicted RBP14.04□□□□□ -0.16
MCF2L-213ENST00000421756 WHRNQ9P202 907 aa14.04□□□□□ -0.16
MCF2L-213ENST00000421756 MAFO75444 373 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-213ENST00000421756 NPTXRO95502 500 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 AKAP5P24588 427 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 SNRPFP62306 86 aaKnown RBP14.03□□□□□ -0.16
MCF2L-213ENST00000421756 PTK6Q13882 451 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 CCNG2Q16589 344 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 XRRA1Q6P2D8 792 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 TRMT10CQ7L0Y3 403 aaKnown RBP14.03□□□□□ -0.16
MCF2L-213ENST00000421756 SPATA18Q8TC71 538 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 OPTNQ96CV9 577 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 TMEM237Q96Q45 408 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 STMN4Q9H169 189 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-213ENST00000421756 C2orf71A6NGG8 1288 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 FAM155BO75949 473 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 RNF8O76064 485 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 MTA2O94776 668 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 RBP3P10745 1247 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 PDGFRAP16234 1089 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 KRT4P19013 534 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 RPA3P35244 121 aaPredicted RBP14.03□□□□□ -0.16
MCF2L-213ENST00000421756 CYP1B1Q16678 543 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 ZC3H12AQ5D1E8 599 aaKnown RBP14.03□□□□□ -0.16
MCF2L-213ENST00000421756 HHATQ5VTY9 493 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 TRPM8Q7Z2W7 1104 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 KCNV2Q8TDN2 545 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 KIF12Q96FN5 646 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 FAM81BQ96LP2 452 aa14.03□□□□□ -0.16
MCF2L-213ENST00000421756 TRABDQ9H4I3 376 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms