RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 SGSM2O43147 1006 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 PRPF3O43395 683 aaKnown RBP9.83□□□□□ -0.84
TRIM39-206ENST00000420746 TNFSF14O43557 240 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 ZNF217O75362 1048 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 CER1O95813 267 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 CDC27P30260 824 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 OPRD1P41143 372 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 IFNAR2P48551 515 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 TUFMP49411 452 aaKnown RBP9.83□□□□□ -0.84
TRIM39-206ENST00000420746 YARSP54577 528 aaKnown RBP9.83□□□□□ -0.84
TRIM39-206ENST00000420746 CXADRP78310 365 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 FAM160A1Q05DH4 1040 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 ZNF77Q15935 545 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 SYCP2LQ5T4T6 812 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 C6orf118Q5T5N4 469 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 EEF1DP3Q658K8 133 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 IL27RAQ6UWB1 636 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 SLC41A1Q8IVJ1 513 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 MAB21L3Q8N8X9 362 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 TXNDC5Q8NBS9 432 aaKnown RBP9.83□□□□□ -0.84
TRIM39-206ENST00000420746 HMGB4Q8WW32 186 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 ZNF419Q96HQ0 510 aaPredicted RBP9.83□□□□□ -0.84
TRIM39-206ENST00000420746 NRSN2Q9GZP1 204 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 CCDC113Q9H0I3 377 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 SLKQ9H2G2 1235 aaPredicted RBP9.83□□□□□ -0.84
TRIM39-206ENST00000420746 SH3GLB2Q9NR46 395 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 RGL1Q9NZL6 768 aa9.83□□□□□ -0.84
TRIM39-206ENST00000420746 DDX25Q9UHL0 483 aaKnown RBP9.83□□□□□ -0.84
TRIM39-206ENST00000420746 IGHV1OR15-9A0A0B4J2B8 117 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 TCRBV21S2A2A0A5A6 115 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 SGK1O00141 431 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 PLK4O00444 970 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 KLF8O95600 359 aaPredicted RBP9.82□□□□□ -0.84
TRIM39-206ENST00000420746 NFATC1O95644 943 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 OR4Q2P0C623 313 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 TCF3P15923 654 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 EIF2DP41214 584 aaKnown RBP9.82□□□□□ -0.84
TRIM39-206ENST00000420746 GRM5P41594 1212 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 RARRES1P49788 294 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 UCNP55089 124 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 USP4Q13107 963 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 RTP5Q14D33 572 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 WDR45BQ5MNZ6 344 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 TMEM150AQ86TG1 271 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 MON1AQ86VX9 555 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 ALLCQ8N6M5 410 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 TRIML1Q8N9V2 468 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 ATAD1Q8NBU5 361 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 MCPH1Q8NEM0 835 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 ENGASEQ8NFI3 743 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 RHBDD1Q8TEB9 315 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 FOXJ1Q92949 421 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 DYDC2Q96IM9 177 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 HSPA12BQ96MM6 686 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 ZMAT2Q96NC0 199 aaKnown RBP9.82□□□□□ -0.84
TRIM39-206ENST00000420746 PNMA5Q96PV4 448 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 LPIN3Q9BQK8 851 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 CCDC94Q9BW85 323 aaPredicted RBP9.82□□□□□ -0.84
TRIM39-206ENST00000420746 SEMA4CQ9C0C4 833 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 PRDM16Q9HAZ2 1276 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 TM7SF3Q9NS93 570 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 CNTN3Q9P232 1028 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 NXF1Q9UBU9 619 aaKnown RBP9.82□□□□□ -0.84
TRIM39-206ENST00000420746 BRPF3Q9ULD4 1205 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 SLC27A5Q9Y2P5 690 aa9.82□□□□□ -0.84
TRIM39-206ENST00000420746 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.82□□□□□ -0.84
TRIM39-206ENST00000420746 SPTAN1Q13813 2472 aaKnown RBP9.81□□□□□ -0.84
TRIM39-206ENST00000420746 GOLGA4Q13439 2230 aaKnown RBP9.81□□□□□ -0.84
TRIM39-206ENST00000420746 A0A0A0MRY4 1105 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 A0A1B0GTW7 788 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 SLC37A4O43826 429 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 LARGE1O95461 756 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 F11P03951 625 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 CDK4P11802 303 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 GP1BBP13224 206 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 ATF6P18850 670 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 TYMPP19971 482 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 CHMLP26374 656 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 HNF1BP35680 557 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 MATKP42679 507 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 AARSP49588 968 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRIM39-206ENST00000420746 NLRP12P59046 1061 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 NUCB1Q02818 461 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 CTTNQ14247 550 aaKnown RBP9.81□□□□□ -0.84
TRIM39-206ENST00000420746 SUZ12Q15022 739 aaKnown RBP9.81□□□□□ -0.84
TRIM39-206ENST00000420746 TAF12Q16514 161 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 ATF7IP2Q5U623 682 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 USP37Q86T82 979 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 SPACA3Q8IXA5 215 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 PGBD3Q8N328 593 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 TTC9BQ8N6N2 239 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 KIAA1958Q8N8K9 716 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 KCNV2Q8TDN2 545 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 MRPS31Q92665 395 aaKnown RBP9.81□□□□□ -0.84
TRIM39-206ENST00000420746 FGF11Q92914 225 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 MED8Q96G25 268 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 CCDC43Q96MW1 224 aaKnown RBP9.81□□□□□ -0.84
TRIM39-206ENST00000420746 TMEM206Q9H813 350 aa9.81□□□□□ -0.84
TRIM39-206ENST00000420746 ANKMY1Q9P2S6 941 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms