RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 STPG1Q5TH74 334 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 ADALQ6DHV7 355 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 IL31Q6EBC2 164 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 KCNN1Q92952 543 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 CYP2S1Q96SQ9 504 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 FGFBP2Q9BYJ0 223 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 PARVGQ9HBI0 331 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 KCND2Q9NZV8 630 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 DAXXQ9UER7 740 aaPredicted RBP13.9□□□□□ -0.18
LINC00339-203ENST00000420503 ODF2LQ9ULJ1 636 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 WNT6Q9Y6F9 365 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 NUP205Q92621 2012 aa13.9□□□□□ -0.18
LINC00339-203ENST00000420503 CACNA1EQ15878 2313 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 TRDMT1O14717 391 aaKnown RBP13.89□□□□□ -0.19
LINC00339-203ENST00000420503 TOP3BO95985 862 aaKnown RBP13.89□□□□□ -0.19
LINC00339-203ENST00000420503 ZNF806P0C7X5 589 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 CYP2F1P24903 491 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 WEE1P30291 646 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 MPLP40238 635 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 TUFMP49411 452 aaKnown RBP13.89□□□□□ -0.19
LINC00339-203ENST00000420503 TAF6P49848 677 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 GTF2BQ00403 316 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 PLK5Q496M5 336 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 C1orf228Q6PIY5 440 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 CACNA2D4Q7Z3S7 1137 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 SFR1Q86XK3 245 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 SFTPA1Q8IWL2 248 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 PDCL2Q8N4E4 241 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 C12orf50Q8NA57 414 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-203ENST00000420503 RPLP0P6Q8NHW5 317 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 RAD54LQ92698 747 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 SAAL1Q96ER3 474 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 GCNAQ96QF7 691 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 TBC1D7Q9P0N9 293 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 HSFX1Q9UBD0 423 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 L1RE1Q9UN81 338 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 SLC8A2Q9UPR5 921 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 ZFYVE26Q68DK2 2539 aa13.89□□□□□ -0.19
LINC00339-203ENST00000420503 MYOFQ9NZM1 2061 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 KPNA7A9QM74 516 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 H0YCG3 227 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 SCAMP3O14828 347 aaKnown RBP13.88□□□□□ -0.19
LINC00339-203ENST00000420503 PRPF40AO75400 957 aaKnown RBP13.88□□□□□ -0.19
LINC00339-203ENST00000420503 FGF19O95750 216 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 KRT18P05783 430 aaKnown RBP13.88□□□□□ -0.19
LINC00339-203ENST00000420503 SPINK2P20155 84 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 GJB2P29033 226 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 POLR2BP30876 1174 aaKnown RBP13.88□□□□□ -0.19
LINC00339-203ENST00000420503 GJA4P35212 333 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 AVPR1AP37288 418 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.19
LINC00339-203ENST00000420503 BFSP1Q12934 665 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 TAF12Q16514 161 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 SYNPOQ8N3V7 929 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 PKMYT1Q99640 499 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 DUSP15Q9H1R2 295 aaPredicted RBP13.88□□□□□ -0.19
LINC00339-203ENST00000420503 LINC00597Q9H2U6 94 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 TRPC7Q9HCX4 862 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 TDP1Q9NUW8 608 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 THG1LQ9NWX6 298 aaKnown RBP13.88□□□□□ -0.19
LINC00339-203ENST00000420503 AGO2Q9UKV8 859 aaKnown RBP13.88□□□□□ -0.19
LINC00339-203ENST00000420503 C2CD2Q9Y426 696 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 ASCC3Q8N3C0 2202 aaKnown RBP13.88□□□□□ -0.19
LINC00339-203ENST00000420503 PTPRDP23468 1912 aa13.88□□□□□ -0.19
LINC00339-203ENST00000420503 THADAQ6YHU6 1953 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 GOLGA8IPA6NC78 632 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 C2orf78A6NCI8 922 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 GOLGA8JA6NMD2 632 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 TBCAO75347 108 aaKnown RBP13.87□□□□□ -0.19
LINC00339-203ENST00000420503 KCNK5O95279 499 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 BCKDHBP21953 392 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 CASP5P51878 434 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 LIMK1P53667 647 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 ZXDBP98169 803 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 MESP2Q0VG99 397 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 ZNF77Q15935 545 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 KYAT1Q16773 422 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 C8orf34Q49A92 452 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 LMBRD2Q68DH5 695 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-203ENST00000420503 PSAPL1Q6NUJ1 521 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 DYMQ7RTS9 669 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 MON1AQ86VX9 555 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 METTL23Q86XA0 190 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 CD302Q8IX05 232 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 THEM5Q8N1Q8 247 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 C1orf127Q8N9H9 656 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 CXorf38Q8TB03 319 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 SPPL2BQ8TCT7 592 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 EPSTI1Q96J88 318 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 TMX3Q96JJ7 454 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 P2RY13Q9BPV8 354 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 TPSD1Q9BZJ3 242 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 CCSER1Q9C0I3 900 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 ASB7Q9H672 318 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 ANGPTL2Q9UKU9 493 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 DERAQ9Y315 318 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 PCDHB5Q9Y5E4 795 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 STYXL1Q9Y6J8 313 aa13.87□□□□□ -0.19
LINC00339-203ENST00000420503 C1QTNF9BB2RNN3 333 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms