RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 ANO9A1A5B4 782 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 C4orf47A7E2U8 309 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 SOBPA7XYQ1 873 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 LAD1O00515 517 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 PIRO00625 290 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 DCLK1O15075 740 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 OGTO15294 1046 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 RHOBTB1O94844 696 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 APBB3O95704 486 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 CAVIN2O95810 425 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 F11P03951 625 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 NFICP08651 508 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 HAPLN1P10915 354 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 DDX6P26196 483 aaKnown RBP eCLIP11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 NMT1P30419 496 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 AVPR1AP37288 418 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 PRPHP41219 470 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 MATR3P43243 847 aaKnown RBP eCLIP11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 NLRP12P59046 1061 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 AMPD2Q01433 879 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 CREB5Q02930 508 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 SMARCB1Q12824 385 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 BFSP1Q12934 665 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 ZNF268Q14587 947 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 PDGFRLQ15198 375 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 JADE1Q6IE81 842 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 SYT2Q8N9I0 419 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 RPLP0P6Q8NHW5 317 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 SPPL2BQ8TCT7 592 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 GIPC2Q8TF65 315 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 P2RY13Q9BPV8 354 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 ADAM33Q9BZ11 813 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 RPF1Q9H9Y2 349 aaKnown RBP11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 TDP1Q9NUW8 608 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 KCND2Q9NZV8 630 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 DSEQ9UL01 958 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 CIZ1Q9ULV3 898 aaPredicted RBP11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 PCDHB6Q9Y5E3 794 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 KIAA1549LQ6ZVL6 1849 aa11.04□□□□□ -0.64
TNFAIP3-202ENST00000420009 A0A0B4J269 797 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 TMEM8BA6NDV4 472 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 H0YCG3 227 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 HNRNPDLO14979 420 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 CSRP1P21291 193 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 U2AF2P26368 475 aaKnown RBP eCLIP11.03□□□□□ -0.642e-16■■■■□ 24.9
TNFAIP3-202ENST00000420009 GJA4P35212 333 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 LIG4P49917 911 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 GALK1P51570 392 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 CDR1P51861 262 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 NEK4P51957 841 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 SLC12A3P55017 1021 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 FOXC1Q12948 553 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 DMC1Q14565 340 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 SH3PXD2AQ5TCZ1 1133 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 DAB2IPQ5VWQ8 1189 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 PMS2CLQ68D20 193 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 LRRTM3Q86VH5 581 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 MON1AQ86VX9 555 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 CD302Q8IX05 232 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 KCTD17Q8N5Z5 321 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 MAB21L3Q8N8X9 362 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 GATA6Q92908 595 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 ACDQ96AP0 544 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 BICD1Q96G01 975 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 PNMA5Q96PV4 448 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 LLPHQ9BRT6 129 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 CCSER1Q9C0I3 900 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 LARSQ9P2J5 1176 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 CPSF3Q9UKF6 684 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 DERAQ9Y315 318 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 OBSL1O75147 1896 aa11.03□□□□□ -0.64
TNFAIP3-202ENST00000420009 DENND4CQ5VZ89 1909 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 CDX4O14627 284 aaPredicted RBP11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 TADA3O75528 432 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 CEACAM1P13688 526 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 SPINK2P20155 84 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 SCP2P22307 547 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 USP4Q13107 963 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 GNL2Q13823 731 aaKnown RBP11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 MTF1Q14872 753 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 TMEM132DQ14C87 1099 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 ZNF77Q15935 545 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 TAF12Q16514 161 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 ARSHQ5FYA8 562 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 TXNDC8Q6A555 127 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 CC2D1AQ6P1N0 951 aaPredicted RBP11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 SLC39A4Q6P5W5 647 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 DTHD1Q6ZMT9 781 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 C11orf74Q86VG3 221 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 CCDC83Q8IWF9 413 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 CPA6Q8N4T0 437 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 ECT2Q9H8V3 914 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 TMEM9BQ9NQ34 198 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 ABI2Q9NYB9 513 aaPredicted RBP11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 C2CD2Q9Y426 696 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 FREM2Q5SZK8 3169 aa11.02□□□□□ -0.65
TNFAIP3-202ENST00000420009 PKD1L2Q7Z442 2459 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 NPHP3-ACAD11A0A0J9YXS1 232 aa11.01□□□□□ -0.65
TNFAIP3-202ENST00000420009 CYB561D2O14569 222 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms