RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 TDRPQ86YL5 185 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 RFWD2Q8NHY2 731 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 ACTL9Q8TC94 416 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 RSAD2Q8WXG1 361 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 ATG4CQ96DT6 458 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 PAFAH2Q99487 392 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 OSBPL1AQ9BXW6 950 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 hCG_1818297A0A087WSY0 165 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 TYROBPO43914 113 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 PSEN1P49768 467 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 EMC2Q15006 297 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 CCDC6Q16204 474 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 SUPT20HQ8NEM7 779 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 KAT6AQ92794 2004 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 DENND2DQ9H6A0 471 aaPredicted RBP15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 RPAP3Q9H6T3 665 aaPredicted RBP15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 SLC17A7Q9P2U7 560 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 MYH9P35579 1960 aaKnown RBP15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 WEE2P0C1S8 567 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 PHBP35232 272 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 ABL2P42684 1182 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 ACTR2P61160 394 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 BASP1P80723 227 aaKnown RBP15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 OTUD4Q01804 1114 aaKnown RBP15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 PLEKHG4Q58EX7 1191 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 FNBP1LQ5T0N5 605 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 GPAT2Q6NUI2 795 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 APBB1IPQ7Z5R6 666 aaPredicted RBP15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 FBXO36Q8NEA4 188 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 INPP5DQ92835 1189 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 YIPF3Q9GZM5 350 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 SHOC2Q9UQ13 582 aa15.95■□□□□ 0.14
SEMA3B-203ENST00000419007 CST8O60676 142 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 CST3P01034 146 aaPredicted RBP15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 TPBGLP0DKB5 382 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 TBXAS1P24557 533 aaPredicted RBP15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 NRLP54845 237 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 ARL4CP56559 192 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 NAIF1Q69YI7 327 aaPredicted RBP15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 VSIG10LQ86VR7 867 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 SLC9A2Q9UBY0 812 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 SLC24A2Q9UI40 661 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 CLUHO75153 1309 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 WFS1O76024 890 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 LUC7L3O95232 432 aaKnown RBP15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 OASLQ15646 514 aaKnown RBP15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 LRRC6Q86X45 466 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 ATP11CQ8NB49 1132 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 PCDH9Q9HC56 1237 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 HEY2Q9UBP5 337 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 PCSK1NQ9UHG2 260 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 RABGEF1Q9UJ41 708 aa15.94■□□□□ 0.14
SEMA3B-203ENST00000419007 DKC1O60832 514 aaKnown RBP eCLIP15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 CALB1P05937 261 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 CD19P15391 556 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 DPEP1P16444 411 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 PSMA2P25787 234 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 CDKN2BP42772 138 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 CCNHP51946 323 aaPredicted RBP15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 RFWD3Q6PCD5 774 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 CLNKQ7Z7G1 428 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 TMEM35BQ8NCS4 154 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 ASAP3Q8TDY4 903 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 TTC17Q96AE7 1141 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 CHMP2BQ9UQN3 213 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 IKBKGQ9Y6K9 419 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 COL2A1P02458 1487 aaPredicted RBP15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 SMNDC1O75940 238 aaKnown RBP eCLIP15.93■□□□□ 0.144e-6■□□□□ 11.3
SEMA3B-203ENST00000419007 ZWINTO95229 277 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 PTDSS1P48651 473 aaKnown RBP15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 MCL1Q07820 350 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 MUM1Q2TAK8 710 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 LPAR1Q92633 364 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 NUMBLQ9Y6R0 609 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 TCRBV7S3A2A0A539 114 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 C2orf71A6NGG8 1288 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 H0YCG3 227 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 TBC1D12O60347 775 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 STBD1O95210 358 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 MARK3P27448 753 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 PTPN4P29074 926 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 SNRNP48Q6IEG0 339 aaKnown RBP15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 MANSC1Q9H8J5 431 aa15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 DRG1Q9Y295 367 aaKnown RBP15.93■□□□□ 0.14
SEMA3B-203ENST00000419007 ENO4A6NNW6 628 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 STAM2O75886 525 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 MT-ND3P03897 115 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 KCNA2P16389 499 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 TNFSF9P41273 254 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 ERFP50548 548 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 MYL6P60660 151 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 SLC45A4Q5BKX6 768 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 EFHC2Q5JST6 749 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 RGS9BPQ6ZS82 235 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 SCYL3Q8IZE3 742 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 FAM71DQ8N9W8 422 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 CPT1BQ92523 772 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 TRIM55Q9BYV6 548 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 MTMR12Q9C0I1 747 aa15.92■□□□□ 0.14
SEMA3B-203ENST00000419007 SYNCQ9H7C4 482 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms