RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 FBXO47Q5MNV8 452 aa20.34■□□□□ 0.85
RAB3IP-205ENST00000417413 LIMS2Q7Z4I7 341 aa20.34■□□□□ 0.85
RAB3IP-205ENST00000417413 MAATS1Q7Z4T9 603 aa20.34■□□□□ 0.85
RAB3IP-205ENST00000417413 C18orf8Q96DM3 657 aa20.34■□□□□ 0.85
RAB3IP-205ENST00000417413 FAM105AQ9NUU6 356 aa20.34■□□□□ 0.85
RAB3IP-205ENST00000417413 GDAP2Q9NXN4 497 aa20.34■□□□□ 0.85
RAB3IP-205ENST00000417413 FRMPD3Q5JV73 1810 aa20.34■□□□□ 0.85
RAB3IP-205ENST00000417413 SIGLEC16A6NMB1 481 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 ERBB2P04626 1255 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 PFKMP08237 780 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 PNPLA4P41247 253 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 EPHB4P54760 987 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 NFX1Q12986 1120 aaKnown RBP20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 ZNF268Q14587 947 aaPredicted RBP20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 UNC93AQ86WB7 457 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 XYLT1Q86Y38 959 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 RHOT1Q8IXI2 618 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 DNAJC5GQ8N7S2 189 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 UBA3Q8TBC4 463 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 ZNF560Q96MR9 790 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 PPP1R10Q96QC0 940 aaKnown RBP20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 AGO3Q9H9G7 860 aaKnown RBP20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 GOLGA2P5Q9HBQ8 144 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 WDR35Q9P2L0 1181 aa20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.33■□□□□ 0.84
RAB3IP-205ENST00000417413 KPNA7A9QM74 516 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 TTI1O43156 1089 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 PHF2O75151 1096 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 LRPAP1P30533 357 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 THPOP40225 353 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 PAK2Q13177 524 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 PDCLQ13371 301 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 ITGA7Q13683 1181 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 STILQ15468 1287 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 CYP1B1Q16678 543 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 TRIM71Q2Q1W2 868 aaKnown RBP20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 DCUN1D2Q6PH85 259 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 KATNAL2Q8IYT4 538 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 NIPA2Q8N8Q9 360 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 C12orf29Q8N999 325 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 EIF1ADQ8N9N8 165 aaKnown RBP20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 KBTBD7Q8WVZ9 684 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 PLVAPQ9BX97 442 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 VIPAS39Q9H9C1 493 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 TSPAN16Q9UKR8 245 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 NFU1Q9UMS0 254 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 USTQ9Y2C2 406 aa20.32■□□□□ 0.84
RAB3IP-205ENST00000417413 MEIS3P2A8K0S8 358 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 GPR182O15218 404 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 RARAP10276 462 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 TNNT3P45378 269 aaPredicted RBP20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 TAF6P49848 677 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 ACLYP53396 1101 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 PSMC1P62191 440 aaKnown RBP20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 PTK7Q13308 1070 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 PKDCCQ504Y2 493 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 EMBQ6PCB8 327 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 ACOT1Q86TX2 421 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 IFT81Q8WYA0 676 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 SEC14L1Q92503 715 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 CAVIN3Q969G5 261 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 MCRS1Q96EZ8 462 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 ZFP42Q96MM3 310 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 GLT1D1Q96MS3 346 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 GDAP1L1Q96MZ0 367 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 GOLGA8SH3BPF8 625 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 FGFR1P11362 822 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 CHRNA3P32297 505 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 RFC1P35251 1148 aaPredicted RBP20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 PTGIRP43119 386 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 PIGHQ14442 188 aaPredicted RBP20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 FAM26DQ5JW98 314 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 PPP1R26Q5T8A7 1209 aaPredicted RBP20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 SND1Q7KZF4 910 aaKnown RBP eCLIP20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 DPH6Q7L8W6 267 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 GSTCDQ8NEC7 633 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 JOSD2Q8TAC2 188 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 HERPUD2Q9BSE4 406 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 SEZ6LQ9BYH1 1024 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 HPCAL4Q9UM19 191 aa20.31■□□□□ 0.84
RAB3IP-205ENST00000417413 A0A0U1RQG5 324 aaPredicted RBP20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 F8VP50 259 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 KRT3P12035 628 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 TCF4P15884 667 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 ECHS1P30084 290 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 NNTQ13423 1086 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 CUL1Q13616 776 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 DHX34Q14147 1143 aaKnown RBP20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 SMC1AQ14683 1233 aaKnown RBP20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 GOLGA7BQ2TAP0 167 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 SV2CQ496J9 727 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 TTC27Q6P3X3 843 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 MRPL10Q7Z7H8 261 aaKnown RBP20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 C12orf50Q8NA57 414 aaPredicted RBP20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 OR6B3Q8NGW1 331 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 SH3TC2Q8TF17 1288 aa20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 TRMT13Q9NUP7 481 aaKnown RBP20.3■□□□□ 0.84
RAB3IP-205ENST00000417413 PCYOX1Q9UHG3 505 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms