RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 HTRA2O43464 458 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 GFRA3O60609 400 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 GUCY1B2O75343 617 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 GJB3O75712 270 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 SMNDC1O75940 238 aaKnown RBP eCLIP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 ACTL6BO94805 426 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 UBOX5O94941 541 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TNFRSF6BO95407 300 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 S100A9P06702 114 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MYBL1P10243 752 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 ACTN1P12814 892 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TYMPP19971 482 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 GCH1P30793 250 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 GDI1P31150 447 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 HOXA10P31260 410 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MCM7P33993 719 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 PGM1P36871 562 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 LTBRP36941 435 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CCT4P50991 539 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 ZNF81P51508 661 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 LUMP51884 338 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MAP2K6P52564 334 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 SUMO3P55854 103 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 KCNQ4P56696 695 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 RNF4P78317 190 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 RPP30P78346 268 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 LACTBP83111 547 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 IRF9Q00978 393 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 BEX3Q00994 111 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TEFQ10587 303 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TRDNQ13061 729 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 NNTQ13423 1086 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 SSPNQ14714 243 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 LAPTM4AQ15012 233 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TBCEQ15813 527 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 USP39Q53GS9 565 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 SPDYCQ5MJ68 293 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 NBPF12Q5TAG4 269 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 AADACL4Q5VUY2 407 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 FYB2Q5VWT5 728 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 NUTM2GQ5VZR2 741 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 E4F1Q66K89 784 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 OLFML2BQ68BL8 750 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 ETFRF1Q6IPR1 90 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TMEM154Q6P9G4 183 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 Q6ZNB5 142 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TRIM67Q6ZTA4 783 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 PTCHD4Q6ZW05 846 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 RNF44Q7L0R7 432 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 LRRC8DQ7L1W4 858 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CYFIP1Q7L576 1253 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MIER3Q7Z3K6 550 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 BNIPLQ7Z465 357 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 RABEPKQ7Z6M1 372 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TAF8Q7Z7C8 310 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 GLRX5Q86SX6 157 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM160B2Q86V87 743 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MON1AQ86VX9 555 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 SPATA24Q86W54 205 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 NME9Q86XW9 330 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 PLD6Q8N2A8 252 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CISD2Q8N5K1 135 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 ANKS4BQ8N8V4 417 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MRPL43Q8N983 215 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TDRD5Q8NAT2 981 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 FAM184AQ8NB25 1140 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 POGLUT1Q8NBL1 392 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CNNM3Q8NE01 707 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 RNF139Q8WU17 664 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 KTI12Q96EK9 354 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 PGAP3Q96FM1 320 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 SLC35A4Q96G79 324 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 DHTKD1Q96HY7 919 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MAML3Q96JK9 1138 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 GAL3ST1Q99999 423 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 TUBA1CQ9BQE3 449 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 REEP2Q9BRK0 252 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 NTPCRQ9BSD7 190 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 PLVAPQ9BX97 442 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 ACE2Q9BYF1 805 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MAGEB5Q9BZ81 275 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 GCOM2Q9BZD3 368 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 ACPTQ9BZG2 426 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 FTOQ9C0B1 505 aaKnown RBP eCLIP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 GRIP2Q9C0E4 1043 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 VCPKMTQ9H867 229 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CRLF2Q9HC73 371 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CD93Q9NPY3 652 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 A1CFQ9NQ94 594 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 DECR2Q9NUI1 292 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 DDX43Q9NXZ2 648 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 IL20Q9NYY1 176 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 SELENONQ9NZV5 590 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MARCH4Q9P2E8 410 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 FBXO40Q9UH90 709 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 MSRAQ9UJ68 235 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CPSF3Q9UKF6 684 aaKnown RBP3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 LIMCH1Q9UPQ0 1083 aa3.34□□□□□ -1.87
CTDSPL-203ENST00000416688 CHKBQ9Y259 395 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms