RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 PIK3R5Q8WYR1 880 aa15.46■□□□□ 0.07
SGCE-202ENST00000415788 TATDN2Q93075 761 aa15.46■□□□□ 0.07
SGCE-202ENST00000415788 PCMTD1Q96MG8 357 aaPredicted RBP15.46■□□□□ 0.07
SGCE-202ENST00000415788 ABCB6Q9NP58 842 aa15.46■□□□□ 0.07
SGCE-202ENST00000415788 NGRNQ9NPE2 291 aaKnown RBP15.46■□□□□ 0.07
SGCE-202ENST00000415788 LZTFL1Q9NQ48 299 aa15.46■□□□□ 0.07
SGCE-202ENST00000415788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.46■□□□□ 0.07
SGCE-202ENST00000415788 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.46■□□□□ 0.07
SGCE-202ENST00000415788 MRPL17Q9NRX2 175 aaKnown RBP15.46■□□□□ 0.07
SGCE-202ENST00000415788 RSPH14Q9UHP6 348 aa15.46■□□□□ 0.07
SGCE-202ENST00000415788 POLIQ9UNA4 740 aa15.46■□□□□ 0.07
SGCE-202ENST00000415788 GRM6O15303 877 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 WARSP23381 471 aaKnown RBP15.46■□□□□ 0.06
SGCE-202ENST00000415788 MFAP3P55082 362 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 MRPL58Q14197 206 aaKnown RBP15.46■□□□□ 0.06
SGCE-202ENST00000415788 MTF1Q14872 753 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 PTPROQ16827 1216 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 VARS2Q5ST30 1063 aaKnown RBP15.46■□□□□ 0.06
SGCE-202ENST00000415788 KLHDC7AQ5VTJ3 777 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 ZNF280DQ6N043 979 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 PHLDB3Q6NSJ2 640 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 WDR93Q6P2C0 686 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 TMC7Q7Z402 723 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 THEM5Q8N1Q8 247 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 TCF25Q9BQ70 676 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 LSM14BQ9BX40 385 aaKnown RBP15.46■□□□□ 0.06
SGCE-202ENST00000415788 DNAI2Q9GZS0 605 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 FBXL5Q9UKA1 691 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 IRAK3Q9Y616 596 aa15.46■□□□□ 0.06
SGCE-202ENST00000415788 SOX1O00570 391 aaPredicted RBP15.45■□□□□ 0.06
SGCE-202ENST00000415788 GABRDO14764 452 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 MAGEA9P43362 315 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 GYS2P54840 703 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 PDE4CQ08493 712 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 TRIM14Q14142 442 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 CASP8Q14790 479 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 HABP4Q5JVS0 413 aaKnown RBP15.45■□□□□ 0.06
SGCE-202ENST00000415788 RTP2Q5QGT7 225 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 KIAA0319Q5VV43 1072 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 SCARA5Q6ZMJ2 495 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 TAS1R1Q7RTX1 841 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 RIN2Q8WYP3 895 aaPredicted RBP15.45■□□□□ 0.06
SGCE-202ENST00000415788 ELMO3Q96BJ8 720 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 IQCDQ96DY2 449 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 PNKPQ96T60 521 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 SNX25Q9H3E2 840 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 SMYD3Q9H7B4 428 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 SIX2Q9NPC8 291 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 UBE2TQ9NPD8 197 aaPredicted RBP15.45■□□□□ 0.06
SGCE-202ENST00000415788 ENTPD7Q9NQZ7 604 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 TIMM13Q9Y5L4 95 aaPredicted RBP15.45■□□□□ 0.06
SGCE-202ENST00000415788 BACE2Q9Y5Z0 518 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 SCN1AP35498 2009 aa15.45■□□□□ 0.06
SGCE-202ENST00000415788 NLRC5Q86WI3 1866 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 FSCN2O14926 492 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 LPXNO60711 386 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 UCHL3P15374 230 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 TRIM21P19474 475 aaKnown RBP15.44■□□□□ 0.06
SGCE-202ENST00000415788 PCSK1P29120 753 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 INCA1Q0VD86 236 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 UNC93AQ86WB7 457 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 ARHGEF19Q8IW93 802 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 GDPD5Q8WTR4 605 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 KBTBD7Q8WVZ9 684 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 NUP58Q9BVL2 599 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 IRX2Q9BZI1 471 aaPredicted RBP15.44■□□□□ 0.06
SGCE-202ENST00000415788 FAM207AQ9NSI2 230 aaPredicted RBP15.44■□□□□ 0.06
SGCE-202ENST00000415788 MTRRQ9UBK8 725 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 LCMT1Q9UIC8 334 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 RANBP2P49792 3224 aaKnown RBP15.44■□□□□ 0.06
SGCE-202ENST00000415788 EPOPA6NHQ4 379 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 OR6C75A6NL08 312 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 WEE2P0C1S8 567 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 PSMD5Q16401 504 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 MAP9Q49MG5 647 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 DPY19L2P1Q6NXN4 242 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 RRAGAQ7L523 313 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 OR6B3Q8NGW1 331 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 LNX1Q8TBB1 728 aaPredicted RBP15.44■□□□□ 0.06
SGCE-202ENST00000415788 B3GALT6Q96L58 329 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 ACBD6Q9BR61 282 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 TTYH1Q9H313 450 aaPredicted RBP15.44■□□□□ 0.06
SGCE-202ENST00000415788 DDX43Q9NXZ2 648 aaKnown RBP15.44■□□□□ 0.06
SGCE-202ENST00000415788 FNIP2Q9P278 1114 aa15.44■□□□□ 0.06
SGCE-202ENST00000415788 BARX2Q9UMQ3 279 aaPredicted RBP15.44■□□□□ 0.06
SGCE-202ENST00000415788 DNAJB1P25685 340 aa15.43■□□□□ 0.06
SGCE-202ENST00000415788 GNL1P36915 607 aaPredicted RBP15.43■□□□□ 0.06
SGCE-202ENST00000415788 NOP2P46087 812 aaKnown RBP15.43■□□□□ 0.06
SGCE-202ENST00000415788 KLK7P49862 253 aa15.43■□□□□ 0.06
SGCE-202ENST00000415788 CDH8P55286 799 aa15.43■□□□□ 0.06
SGCE-202ENST00000415788 ERVFC1P60507 584 aa15.43■□□□□ 0.06
SGCE-202ENST00000415788 CAMK1Q14012 370 aa15.43■□□□□ 0.06
SGCE-202ENST00000415788 CTXN3Q4LDR2 81 aa15.43■□□□□ 0.06
SGCE-202ENST00000415788 FIGNQ5HY92 759 aa15.43■□□□□ 0.06
SGCE-202ENST00000415788 SLC35F6Q8N357 371 aa15.43■□□□□ 0.06
SGCE-202ENST00000415788 MRPL43Q8N983 215 aaKnown RBP15.43■□□□□ 0.06
SGCE-202ENST00000415788 MICAL1Q8TDZ2 1067 aa15.43■□□□□ 0.06
SGCE-202ENST00000415788 MRPL38Q96DV4 380 aaKnown RBP15.43■□□□□ 0.06
SGCE-202ENST00000415788 LRCH3Q96II8 777 aa15.43■□□□□ 0.06
SGCE-202ENST00000415788 MRPL45Q9BRJ2 306 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms