RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 ZFP42Q96MM3 310 aa6.7□□□□□ -1.34
LMBR1-204ENST00000415428 SLC12A7Q9Y666 1083 aa6.7□□□□□ -1.34
LMBR1-204ENST00000415428 OTOL1A6NHN0 477 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-204ENST00000415428 SLC9A3R1O14745 358 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-204ENST00000415428 USP17L7P0C7H9 530 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 CISD3P0C7P0 127 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 FGFR4P22455 802 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 CTSKP43235 329 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 ACADVLP49748 655 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 CLCNKBP51801 687 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 FAM193AP78312 1265 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 PROX2Q3B8N5 592 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 C20orf194Q5TEA3 1177 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 DPH6Q7L8W6 267 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 GPR155Q7Z3F1 870 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 LSMEM2Q8N112 164 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 METTL13Q8N6R0 699 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 MDGA1Q8NFP4 955 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 MCRS1Q96EZ8 462 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 C8orf48Q96LL4 319 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 PSMG3-AS1Q96PY0 264 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 WIPF3A6NGB9 483 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 TLX3O43711 291 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-204ENST00000415428 CACNG3O60359 315 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 ERLIN2O94905 339 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 LATS1O95835 1130 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 HLA-EP13747 358 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 GRM2Q14416 872 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 IQCEQ6IPM2 695 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 TMEM86AQ8N2M4 240 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 PRR11Q96HE9 360 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-204ENST00000415428 TOPORSQ9NS56 1045 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-204ENST00000415428 DIAPH3Q9NSV4 1193 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 ORC3Q9UBD5 711 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-204ENST00000415428 SPTBN4Q9H254 2564 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 CCDC69A6NI79 296 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 K7ENP7 123 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 RPA1P27694 616 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 CREB3L3Q68CJ9 461 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 INO80CQ6PI98 192 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-204ENST00000415428 Q6ZNB5 142 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 DNAJB7Q7Z6W7 309 aaPredicted RBP6.69□□□□□ -1.34
LMBR1-204ENST00000415428 HOMER1Q86YM7 354 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 SCML1Q9UN30 329 aa6.69□□□□□ -1.34
LMBR1-204ENST00000415428 H0YCG3 227 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 CSH1P0DML2 217 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 CSH2P0DML3 217 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 MARCKSP29966 332 aaPredicted RBP6.68□□□□□ -1.34
LMBR1-204ENST00000415428 ACTN2P35609 894 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 ABCG1P45844 678 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 CCR5P51681 352 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 TMPRSS3P57727 454 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 MAPK7Q13164 816 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 RALYLQ86SE5 291 aaKnown RBP6.68□□□□□ -1.34
LMBR1-204ENST00000415428 SCML4Q8N228 414 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 ZMAT2Q96NC0 199 aaKnown RBP6.68□□□□□ -1.34
LMBR1-204ENST00000415428 ACBD6Q9BR61 282 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 LXNQ9BS40 222 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 TMEM74BQ9NUR3 256 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 TDP1Q9NUW8 608 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 RBM8AQ9Y5S9 174 aaKnown RBP6.68□□□□□ -1.34
LMBR1-204ENST00000415428 TENM4Q6N022 2769 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 METTL12A8MUP2 240 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 SUV39H1O43463 412 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 TSPAN3O60637 253 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 RNF40O75150 1001 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 RAD51AP2Q09MP3 1159 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 PDIA5Q14554 519 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 SHBQ15464 509 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 WDR45BQ5MNZ6 344 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 EMC10Q5UCC4 262 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 MPZL3Q6UWV2 235 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 MINDY1Q8N5J2 469 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 TMEM87AQ8NBN3 555 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 RNF149Q8NC42 400 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 TMEM176AQ96HP8 235 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 LMLNQ96KR4 655 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 SLC2A11Q9BYW1 496 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 CDT1Q9H211 546 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 ASB7Q9H672 318 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 VRTNQ9H8Y1 702 aa6.68□□□□□ -1.34
LMBR1-204ENST00000415428 WSB2Q9NYS7 404 aaPredicted RBP6.68□□□□□ -1.34
LMBR1-204ENST00000415428 VILLO15195 856 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 LARGE1O95461 756 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 INHBCP55103 352 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 TMEM92Q6UXU6 159 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 KDM4CQ9H3R0 1056 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 TBC1D14Q9P2M4 693 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 ANKMY1Q9P2S6 941 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 PCDHGA7Q9Y5G6 932 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 SHROOM3Q8TF72 1996 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 ZBTB43O43298 467 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 CCDC192P0DO97 292 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 GABRG2P18507 467 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 ITGB6P18564 788 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 VIPR2P41587 438 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 CYP4A11Q02928 519 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 MTF1Q14872 753 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 HTR3DQ70Z44 454 aa6.67□□□□□ -1.34
LMBR1-204ENST00000415428 HEATR3Q7Z4Q2 680 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms