RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TDHQ8IZJ6 230 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 FAXDC2Q96IV6 333 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 SPAG5Q96R06 1193 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 TLR10Q9BXR5 811 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 FAN1Q9Y2M0 1017 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 KPNA7A9QM74 516 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 NCK2O43639 380 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 KIF4AO95239 1232 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 MYOGP15173 224 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 OR1G1P47890 313 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 ALDH7A1P49419 539 aaKnown RBP10.6□□□□□ -0.71
DDB1-202ENST00000414411 TAF6P49848 677 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 NOP14P78316 857 aaKnown RBP10.6□□□□□ -0.71
DDB1-202ENST00000414411 PTK2Q05397 1052 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 MYO1EQ12965 1108 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 GPS2Q13227 327 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 ZNF699Q32M78 642 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 MAP9Q49MG5 647 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 WDR44Q5JSH3 913 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 KCNT2Q6UVM3 1135 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 IRF2BP2Q7Z5L9 587 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 TMEM173Q86WV6 379 aaPredicted RBP10.6□□□□□ -0.71
DDB1-202ENST00000414411 MMGT1Q8N4V1 131 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 FIBCD1Q8N539 461 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.6□□□□□ -0.71
DDB1-202ENST00000414411 MARCH5Q9NX47 278 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 APEX2Q9UBZ4 518 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 ADAMTS1Q9UHI8 967 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 PCDHGC5Q9Y5F6 944 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 PCDHA11Q9Y5I1 949 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 BZW2Q9Y6E2 419 aaKnown RBP10.6□□□□□ -0.71
DDB1-202ENST00000414411 KIAA1671Q9BY89 1806 aa10.6□□□□□ -0.71
DDB1-202ENST00000414411 MYO9BQ13459 2157 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 LINC01553A4QN01 128 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 NT5C1B-RDH14C9J2C7 533 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 M0QZQ0 153 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 LAG3P18627 525 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 ANXA13P27216 316 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 PBX3P40426 434 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 PRKCIP41743 596 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 ASPAP45381 313 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 JAM2P57087 298 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 GCNT1Q02742 428 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 TIGD5Q53EQ6 642 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 ZNF667Q5HYK9 610 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 C10orf76Q5T2E6 689 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 ARHGEF19Q8IW93 802 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 CNPY4Q8N129 248 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 SPATA4Q8NEY3 305 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 BCL7CQ8WUZ0 217 aaPredicted RBP10.59□□□□□ -0.71
DDB1-202ENST00000414411 ZNF560Q96MR9 790 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 NT5C1BQ96P26 610 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 COLEC11Q9BWP8 271 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 BCO2Q9BYV7 579 aa10.59□□□□□ -0.71
DDB1-202ENST00000414411 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.59□□□□□ -0.711e-8■■■■■ 44.9
DDB1-202ENST00000414411 PRG3Q9Y2Y8 225 aaPredicted RBP10.59□□□□□ -0.71
DDB1-202ENST00000414411 CARNS1A5YM72 827 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 BTNL10A8MVZ5 291 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 PALMO75781 387 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 ARHGEF15O94989 841 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 CXCR5P32302 372 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 NAP1L1P55209 391 aaKnown RBP10.58□□□□□ -0.72
DDB1-202ENST00000414411 SOWAHAQ2M3V2 549 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 SV2CQ496J9 727 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 CCDC181Q5TID7 509 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 CCDC70Q6NSX1 233 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 GJB7Q6PEY0 223 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 ZNF571Q7Z3V5 609 aaPredicted RBP10.58□□□□□ -0.72
DDB1-202ENST00000414411 RNF168Q8IYW5 571 aaPredicted RBP10.58□□□□□ -0.72
DDB1-202ENST00000414411 SLC39A11Q8N1S5 342 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 COLGALT1Q8NBJ5 622 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 RUBCNQ92622 972 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 CCDC97Q96F63 343 aaPredicted RBP10.58□□□□□ -0.72
DDB1-202ENST00000414411 IGSF21Q96ID5 467 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 SUSD3Q96L08 255 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 KREMEN1Q96MU8 473 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 ZNF558Q96NG5 402 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 PSMB7Q99436 277 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 PACSIN1Q9BY11 444 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 PBX4Q9BYU1 374 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 IMPG2Q9BZV3 1241 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 NIF3L1Q9GZT8 377 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 VIPAS39Q9H9C1 493 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 AJAP1Q9UKB5 411 aaPredicted RBP10.58□□□□□ -0.72
DDB1-202ENST00000414411 ADAM28Q9UKQ2 775 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 POLIQ9UNA4 740 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 YBX2Q9Y2T7 364 aaKnown RBP10.58□□□□□ -0.72
DDB1-202ENST00000414411 SNX9Q9Y5X1 595 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 CDH23Q9H251 3354 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 ATP8B3O60423 1300 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 TADA2AO75478 443 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 FAM163BP0C2L3 166 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 BMPR1AP36894 532 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 PBX2P40425 430 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 BRCC3P46736 316 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 DPH6Q7L8W6 267 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 UBR7Q8N806 425 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 HASPINQ8TF76 798 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 KAT5Q92993 513 aa10.58□□□□□ -0.72
DDB1-202ENST00000414411 SENP8Q96LD8 212 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms