RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 PCDHA6Q9UN73 950 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 NAALADL1Q9UQQ1 740 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 KLHL20Q9Y2M5 609 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 MTO1Q9Y2Z2 717 aaKnown RBP6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 MCF2LO15068 1137 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 PROM1O43490 865 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 MYO1BO43795 1136 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 TBC1D4O60343 1298 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 TOP1P11387 765 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 GNAT1P11488 350 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 CPB1P15086 417 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 NPPBP16860 134 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 IL10P22301 178 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 CDC25BP30305 580 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 CIITAP33076 1130 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 HSPA1LP34931 641 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 PSMC2P35998 433 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 PGM1P36871 562 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 IFNAR2P48551 515 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 FNTBP49356 437 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 MLLT6P55198 1093 aaPredicted RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 RPP30P78346 268 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 TBC1D8BQ0IIM8 1120 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 LSAMPQ13449 338 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 TRIM25Q14258 630 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 LBRQ14739 615 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 ADRM1Q16186 407 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 HP1BP3Q5SSJ5 553 aaPredicted RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 CWF19L1Q69YN2 538 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 RGS9BPQ6ZS82 235 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 ARHGEF18Q6ZSZ5 1173 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 RRAGAQ7L523 313 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 CDH24Q86UP0 819 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 PHYKPLQ8IUZ5 450 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 AGGF1Q8N302 714 aaeCLIP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 CELF5Q8N6W0 485 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 POMGNT2Q8NAT1 580 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 USP38Q8NB14 1042 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 RNF214Q8ND24 703 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 LINS1Q8NG48 757 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 CEP76Q8TAP6 659 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 KCNN1Q92952 543 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 SNX27Q96L92 541 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 FBXL18Q96ME1 805 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 ZNF830Q96NB3 372 aaPredicted RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 ADI1Q9BV57 179 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 APOL6Q9BWW8 343 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 UBE2OQ9C0C9 1292 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 SMG9Q9H0W8 520 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 ADAM7Q9H2U9 754 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 POFUT1Q9H488 388 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 CHODLQ9H9P2 273 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 RBM28Q9NW13 759 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 ZNHIT6Q9NWK9 470 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 SELENONQ9NZV5 590 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 MRPL15Q9P015 296 aaKnown RBP6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 HSF4Q9ULV5 492 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 ITM2BQ9Y287 266 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 DERAQ9Y315 318 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 SQORQ9Y6N5 450 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 KIAA0586Q9BVV6 1533 aa6.29□□□□□ -1.4
CBX1P3-201ENST00000413296 SHROOM2Q13796 1616 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 ABCA5Q8WWZ7 1642 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 PLB1Q6P1J6 1458 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 CARMIL2Q6F5E8 1435 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 TCRBV5S4A2TA0A5A2 114 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 CLRN2A0PK11 232 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 TRIM43BA6NCK2 446 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 A8MV72 311 aaPredicted RBP6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 SGK1O00141 431 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 MAN2B1O00754 1011 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 C2CD2LO14523 706 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 PGRMC2O15173 223 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 STX6O43752 255 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 GSPT1P15170 499 aaKnown RBP6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 FERP16591 822 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 STIP1P31948 543 aaKnown RBP6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 MCAMP43121 646 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 AMPHP49418 695 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 CARSP49589 748 aaKnown RBP6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 STARD6P59095 220 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 ID3Q02535 119 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 SCAPQ12770 1279 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 LASP1Q14847 261 aaKnown RBP6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 KHDC1LQ5JSQ8 128 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 ERMARDQ5T6L9 678 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 FAXCQ5TGI0 409 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 NAA35Q5VZE5 725 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 WDR93Q6P2C0 686 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 FDX2Q6P4F2 183 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 UNC13DQ70J99 1090 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 LRRC8DQ7L1W4 858 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 FAM35AQ86V20 835 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 TDRD5Q8NAT2 981 aaKnown RBP6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 DNAJB8Q8NHS0 232 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 SPATA20Q8TB22 786 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 BRIX1Q8TDN6 353 aaKnown RBP6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 FAM216AQ8WUB2 273 aa6.28□□□□□ -1.4
CBX1P3-201ENST00000413296 TRIM43Q96BQ3 446 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms