RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 OBP2AQ9NY56 170 aa20.68■□□□□ 0.9
CPSF7-204ENST00000413232 SMG5Q9UPR3 1016 aaKnown RBP20.68■□□□□ 0.9
CPSF7-204ENST00000413232 CCL26Q9Y258 94 aa20.68■□□□□ 0.9
CPSF7-204ENST00000413232 PCDHB5Q9Y5E4 795 aa20.68■□□□□ 0.9
CPSF7-204ENST00000413232 SPTBN2O15020 2390 aa20.68■□□□□ 0.9
CPSF7-204ENST00000413232 K7ELQ4 463 aaPredicted RBP20.67■□□□□ 0.9
CPSF7-204ENST00000413232 LDHAP00338 332 aaKnown RBP20.67■□□□□ 0.9
CPSF7-204ENST00000413232 CYP2F1P24903 491 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 CDC25CP30307 473 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 PNPLA4P41247 253 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 NLRP12P59046 1061 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 FOXK2Q01167 660 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 SMARCB1Q12824 385 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 BFSP1Q12934 665 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 CMTM8Q8IZV2 173 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 MAB21L3Q8N8X9 362 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 OR5B17Q8NGF7 314 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 ZSCAN16Q9H4T2 348 aaPredicted RBP20.67■□□□□ 0.9
CPSF7-204ENST00000413232 DDX43Q9NXZ2 648 aaKnown RBP20.67■□□□□ 0.9
CPSF7-204ENST00000413232 NCDNQ9UBB6 729 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 GTF3C4Q9UKN8 822 aa20.67■□□□□ 0.9
CPSF7-204ENST00000413232 OTOL1A6NHN0 477 aaPredicted RBP20.66■□□□□ 0.9
CPSF7-204ENST00000413232 PRPF40AO75400 957 aaKnown RBP20.66■□□□□ 0.9
CPSF7-204ENST00000413232 TGM1P22735 817 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 CXCL12P48061 93 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 ALCAMQ13740 583 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 PON2Q15165 354 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 STK38Q15208 465 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 TAF12Q16514 161 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 DDR2Q16832 855 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 TXNDC8Q6A555 127 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 RALGPS2Q86X27 583 aaPredicted RBP20.66■□□□□ 0.9
CPSF7-204ENST00000413232 CBWD2Q8IUF1 395 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 GPD1LQ8N335 351 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 LRRC52Q8N7C0 313 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 CACTINQ8WUQ7 758 aaKnown RBP20.66■□□□□ 0.9
CPSF7-204ENST00000413232 USP13Q92995 863 aaPredicted RBP20.66■□□□□ 0.9
CPSF7-204ENST00000413232 CHFRQ96EP1 664 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 ACBD6Q9BR61 282 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 FAM126AQ9BYI3 521 aaPredicted RBP20.66■□□□□ 0.9
CPSF7-204ENST00000413232 GKN1Q9NS71 199 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 KBTBD4Q9NVX7 518 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 GDAP2Q9NXN4 497 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 SNX9Q9Y5X1 595 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 SPAG17Q6Q759 2223 aa20.66■□□□□ 0.9
CPSF7-204ENST00000413232 EML5Q05BV3 1969 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 GABRDO14764 452 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 SPTLC2O15270 562 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 TADA3O75528 432 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 KRT19P08727 400 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 CCR3P51677 355 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 TSPY1Q01534 308 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 LPAL2Q16609 132 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 SOWAHAQ2M3V2 549 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 INTS6LQ5JSJ4 861 aaKnown RBP20.65■□□□□ 0.9
CPSF7-204ENST00000413232 CCDC65Q8IXS2 484 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 MSANTD3Q96H12 275 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 FAM83CQ9BQN1 747 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 IER2Q9BTL4 223 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 TRIM9Q9C026 710 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 TMEM206Q9H813 350 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 HPS4Q9NQG7 708 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 INTS13Q9NVM9 706 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 ITGA11Q9UKX5 1188 aa20.65■□□□□ 0.9
CPSF7-204ENST00000413232 MAGED2Q9UNF1 606 aaPredicted RBP20.65■□□□□ 0.9
CPSF7-204ENST00000413232 MYO16Q9Y6X6 1858 aa20.64■□□□□ 0.9
CPSF7-204ENST00000413232 K7ESF4 209 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 HUS1O60921 280 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 ATP2C2O75185 946 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 RBP5P82980 135 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 CCINQ13939 588 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 NFE2Q16621 373 aaPredicted RBP20.64■□□□□ 0.89
CPSF7-204ENST00000413232 FOXD4L5Q5VV16 416 aaPredicted RBP20.64■□□□□ 0.89
CPSF7-204ENST00000413232 TRIM68Q6AZZ1 485 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 SHC4Q6S5L8 630 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 SPEM1Q8N4L4 309 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 CELF5Q8N6W0 485 aaKnown RBP20.64■□□□□ 0.89
CPSF7-204ENST00000413232 LEO1Q8WVC0 666 aaPredicted RBP20.64■□□□□ 0.89
CPSF7-204ENST00000413232 FOXD4L4Q8WXT5 416 aaPredicted RBP20.64■□□□□ 0.89
CPSF7-204ENST00000413232 GCNAQ96QF7 691 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 TNMDQ9H2S6 317 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 PARD6AQ9NPB6 346 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 DLL3Q9NYJ7 618 aa20.64■□□□□ 0.89
CPSF7-204ENST00000413232 MED19A0JLT2 244 aaPredicted RBP20.63■□□□□ 0.89
CPSF7-204ENST00000413232 CHURC1-FNTBB4DL54 471 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 HRO43593 1189 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 LMO2P25791 158 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 CASP1P29466 404 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 FNTBP49356 437 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 SRSF5Q13243 272 aaKnown RBP20.63■□□□□ 0.89
CPSF7-204ENST00000413232 RSPO4Q2I0M5 234 aaPredicted RBP20.63■□□□□ 0.89
CPSF7-204ENST00000413232 PKN3Q6P5Z2 889 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 EPM2AIP1Q7L775 607 aaPredicted RBP20.63■□□□□ 0.89
CPSF7-204ENST00000413232 LIMS2Q7Z4I7 341 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 ADGRF2Q8IZF7 708 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 TMEM86AQ8N2M4 240 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 KBTBD7Q8WVZ9 684 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 DHX58Q96C10 678 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 SLC22A12Q96S37 553 aa20.63■□□□□ 0.89
CPSF7-204ENST00000413232 HELZP42694 1942 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms