RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 CRTAC1Q9NQ79 661 aa14.07□□□□□ -0.16
SSB-203ENST00000413002 CTNND2Q9UQB3 1225 aa14.07□□□□□ -0.16
SSB-203ENST00000413002 PCDHB5Q9Y5E4 795 aa14.07□□□□□ -0.16
SSB-203ENST00000413002 NUMBLQ9Y6R0 609 aa14.07□□□□□ -0.16
SSB-203ENST00000413002 A0A1W2PRU2 124 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 TMEM221A6NGB7 291 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 M0R296 226 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 PSMA7O14818 248 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 IKBKBO14920 756 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 MAPK13O15264 365 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 GPR37L1O60883 481 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 MOSPD3O75425 235 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 PDGFBP01127 241 aaPredicted RBP14.06□□□□□ -0.16
SSB-203ENST00000413002 EPB41P11171 864 aaKnown RBP14.06□□□□□ -0.16
SSB-203ENST00000413002 CCNE1P24864 410 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 PCSK1P29120 753 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 ATICP31939 592 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 PIK3CAP42336 1068 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 ORC1Q13415 861 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 TDGQ13569 410 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 HTR4Q13639 388 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 TEAD2Q15562 447 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 DDR2Q16832 855 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 ZNF667Q5HYK9 610 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 STXBP5Q5T5C0 1151 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 HFE2Q6ZVN8 426 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 SLC44A3Q8N4M1 653 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 SHKBP1Q8TBC3 707 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 SPPL2BQ8TCT7 592 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 TAS1R2Q8TE23 839 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 NELFBQ8WX92 580 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 ZSWIM3Q96MP5 696 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 KXD1Q9BQD3 176 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 LRRC3Q9BY71 257 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 ASAH2Q9NR71 780 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 LMBRD1Q9NUN5 540 aa14.06□□□□□ -0.16
SSB-203ENST00000413002 NOTCH4Q99466 2003 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 MYO10Q9HD67 2058 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 A8MXQ7 604 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 ANHXE9PGG2 379 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 TACC1O75410 805 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 STAU1O95793 577 aaKnown RBP14.05□□□□□ -0.16
SSB-203ENST00000413002 TUFMP49411 452 aaKnown RBP14.05□□□□□ -0.16
SSB-203ENST00000413002 FKBP3Q00688 224 aaKnown RBP14.05□□□□□ -0.16
SSB-203ENST00000413002 CYP27A1Q02318 531 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 SIGLEC14Q08ET2 396 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 PLD1Q13393 1074 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 STIM1Q13586 685 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 NFE2Q16621 373 aaPredicted RBP14.05□□□□□ -0.16
SSB-203ENST00000413002 SGSM1Q2NKQ1 1148 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 DCAF17Q5H9S7 520 aaPredicted RBP14.05□□□□□ -0.16
SSB-203ENST00000413002 MDH1BQ5I0G3 518 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 TCERG1LQ5VWI1 586 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 FAM171BQ6P995 826 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 TMC8Q8IU68 726 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 SPATA2LQ8IUW3 424 aaPredicted RBP14.05□□□□□ -0.16
SSB-203ENST00000413002 SCN4BQ8IWT1 228 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 PSMG2Q969U7 264 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 MYLPFQ96A32 169 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 DHTKD1Q96HY7 919 aaPredicted RBP14.05□□□□□ -0.16
SSB-203ENST00000413002 DUSP9Q99956 384 aaKnown RBP14.05□□□□□ -0.16
SSB-203ENST00000413002 APOBEC3GQ9HC16 384 aaKnown RBP14.05□□□□□ -0.16
SSB-203ENST00000413002 KIAA1468Q9P260 1216 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 IGSF9Q9P2J2 1179 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 CDH9Q9ULB4 789 aa14.05□□□□□ -0.16
SSB-203ENST00000413002 ZNF197O14709 1029 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 CFHP08603 1231 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 GABRR2P28476 465 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 EPHA5P54756 1037 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 LRRC63Q05C16 580 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 VEPH1Q14D04 833 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 TAF12Q16514 161 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 FAM78AQ5JUQ0 283 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 TTI2Q6NXR4 508 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 CLEC17AQ6ZS10 378 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 GAREM2Q75VX8 874 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 ZC3H3Q8IXZ2 948 aaKnown RBP14.04□□□□□ -0.16
SSB-203ENST00000413002 SPATA18Q8TC71 538 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 C2orf15Q8WU43 125 aaKnown RBP14.04□□□□□ -0.16
SSB-203ENST00000413002 SEMA4DQ92854 862 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 PBXIP1Q96AQ6 731 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 ASIC4Q96FT7 647 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 MKNK1Q9BUB5 465 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 PLA2G2FQ9BZM2 168 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 ATXN3LQ9H3M9 355 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 CLSTN2Q9H4D0 955 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 SLITRK6Q9H5Y7 841 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 AVENQ9NQS1 362 aaPredicted RBP14.04□□□□□ -0.16
SSB-203ENST00000413002 HSFX1Q9UBD0 423 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 HMGXB4Q9UGU5 601 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 MAGED2Q9UNF1 606 aaPredicted RBP14.04□□□□□ -0.16
SSB-203ENST00000413002 TECTAO75443 2155 aa14.04□□□□□ -0.16
SSB-203ENST00000413002 PRR33A8MZF0 331 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 CLDN5O00501 218 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 ASS1P00966 412 aaKnown RBP14.03□□□□□ -0.16
SSB-203ENST00000413002 PTPN1P18031 435 aaKnown RBP14.03□□□□□ -0.16
SSB-203ENST00000413002 BDNFP23560 247 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 VIPR2P41587 438 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 ASPAP45381 313 aa14.03□□□□□ -0.16
SSB-203ENST00000413002 CYP4F8P98187 520 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms