RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 CXCL10P02778 98 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 UQCRHP07919 91 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 SETSIPP0DME0 302 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 PRLRP16471 622 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 MMP8P22894 467 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 RRM1P23921 792 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 CYP2C18P33260 490 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 RNASELQ05823 741 aaKnown RBP12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 GPNMBQ14956 572 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 RPS6KA1Q15418 735 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 UPP1Q16831 310 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 MEI1Q5TIA1 1274 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 ARHGAP17Q68EM7 881 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 LCLAT1Q6UWP7 414 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 LIMS2Q7Z4I7 341 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 DEFB128Q7Z7B8 93 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 METTL23Q86XA0 190 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 PDCL2Q8N4E4 241 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 LRRC57Q8N9N7 239 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 SPATA18Q8TC71 538 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 UBE2Q2Q8WVN8 375 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 RSPH1Q8WYR4 309 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 CARD6Q9BX69 1037 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 MIS12Q9H081 205 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 WNT8AQ9H1J5 351 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 SYNCQ9H7C4 482 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 FAM49BQ9NUQ9 324 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 CACNG4Q9UBN1 327 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 ANAPC7Q9UJX3 599 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 TSPAN16Q9UKR8 245 aa12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 ZMYND8Q9ULU4 1186 aaPredicted RBP12.31□□□□□ -0.44
SNRNP35-202ENST00000412157 NCK2O43639 380 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 B3GAT3O94766 335 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 KIF4AO95239 1232 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 PDGFRBP09619 1106 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 FGFR1P11362 822 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 LHX1P48742 406 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 SNX16P57768 344 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 TAP1Q03518 808 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 PTP4A2Q12974 167 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 MESDQ14696 234 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 CLLU1OSQ5K130 101 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 WSCD1Q658N2 575 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 DNAJC24Q6P3W2 148 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 CNKSR3Q6P9H4 555 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 DCLRE1AQ6PJP8 1040 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 SLFN11Q7Z7L1 901 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 OSTM1Q86WC4 334 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 NPAS4Q8IUM7 802 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 CRYBG2Q8N1P7 616 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 OSBPL9Q96SU4 736 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 TLR10Q9BXR5 811 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 MRPL9Q9BYD2 267 aaKnown RBP12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 PARVAQ9NVD7 372 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 WDR35Q9P2L0 1181 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 LCMT1Q9UIC8 334 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 DSEQ9UL01 958 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 COG5Q9UP83 839 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 STXBP5LQ9Y2K9 1186 aa12.3□□□□□ -0.44
SNRNP35-202ENST00000412157 PTPRDP23468 1912 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 ALPK3Q96L96 1907 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 SPOPO43791 374 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 PCSK1P29120 753 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 PAFAH1B1P43034 410 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 OR1G1P47890 313 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 AARSP49588 968 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 DNA2P51530 1060 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 BCAT1P54687 386 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 IKBKEQ14164 716 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 LRRC26Q2I0M4 334 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 PTPN20Q4JDL3 420 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 PPP1R26Q5T8A7 1209 aaPredicted RBP12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 CCDC181Q5TID7 509 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 PLEKHA7Q6IQ23 1121 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 NT5DC3Q86UY8 548 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 C3orf58Q8NDZ4 430 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 RABGGTAQ92696 567 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 CAPZA3Q96KX2 299 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 SYT15Q9BQS2 421 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 SELENOOQ9BVL4 669 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 GOLPH3Q9H4A6 298 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 DPEP3Q9H4B8 488 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 PRDM5Q9NQX1 630 aaPredicted RBP12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 TBC1D13Q9NVG8 400 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 DDX43Q9NXZ2 648 aaKnown RBP12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 PACSIN2Q9UNF0 486 aaPredicted RBP12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 NME7Q9Y5B8 376 aa12.29□□□□□ -0.44
SNRNP35-202ENST00000412157 PATJQ8NI35 1801 aa12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 NLRC5Q86WI3 1866 aa12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 CTAGE15A4D2H0 777 aa12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 MIF4GDA9UHW6 222 aaKnown RBP12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 TMEM189-UBE2V1I3L0A0 370 aa12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 MYO1FO00160 1098 aa12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 GABRDO14764 452 aa12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 SRGAP2O75044 1071 aa12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 CTAGE8P0CG41 777 aa12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 LMO2P25791 158 aa12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 ADORA2BP29275 332 aa12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 GTF2F1P35269 517 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNRNP35-202ENST00000412157 BRCC3P46736 316 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms