RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 CENPPQ6IPU0 288 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 SYTL5Q8TDW5 730 aaPredicted RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 FAR2Q96K12 515 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 OSBPL5Q9H0X9 879 aaPredicted RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 TRIP4Q15650 581 aaPredicted RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 CEP55Q53EZ4 464 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 PRR5LQ6MZQ0 368 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 GJB7Q6PEY0 223 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 CCDC60Q8IWA6 550 aaPredicted RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 COL26A1Q96A83 441 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 FAM167BQ9BTA0 163 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 PIH1D1Q9NWS0 290 aaKnown RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 PODXLO00592 558 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 CLUP10909 449 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 BEX3Q00994 111 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 DDI2Q5TDH0 399 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 STRIP1Q5VSL9 837 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 GPAT2Q6NUI2 795 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 CHMP2BQ9UQN3 213 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 POLR1DQ9Y2S0 133 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 RASSF10A6NK89 507 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 GSSP48637 474 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 ATP12AP54707 1039 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 ETF1P62495 437 aaKnown RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 DENND5BQ6ZUT9 1274 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 EDEM1Q92611 657 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 KLF6Q99612 283 aaPredicted RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 KDM6BO15054 1643 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 SRP72O76094 671 aaKnown RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 SLC8A1P32418 973 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 GLRBP48167 497 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 MAP3K10Q02779 954 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 BFSP2Q13515 415 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 SNRNP35Q16560 246 aaKnown RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 PPM1LQ5SGD2 360 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 SRBD1Q8N5C6 995 aaKnown RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 ABCG4Q9H172 646 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 SMARCAL1Q9NZC9 954 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 AKAP7Q9P0M2 348 aaPredicted RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 IFNAR1P17181 557 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 PCSK1P29120 753 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 GRK3P35626 688 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 MRPS15P82914 257 aaKnown RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 ATP6V0D2Q8N8Y2 350 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 PMM1Q92871 262 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 TARS2Q9BW92 718 aaKnown RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 GPRC5CQ9NQ84 441 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 CEP72Q9P209 647 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 ATP6V1HQ9UI12 483 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 PAIP2BQ9ULR5 123 aaKnown RBP8.76□□□□□ -1.01
SCN9A-203ENST00000409672 NUMA1Q14980 2115 aa8.76□□□□□ -1.01
SCN9A-203ENST00000409672 CFAP99D6REC4 459 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 H7C4K7 107 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 TBX3O15119 743 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 HLA-DQA2P01906 255 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 CYP2C8P10632 490 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 MYL2P10916 166 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 IL10P22301 178 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 USP39Q53GS9 565 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 PKD2L2Q9NZM6 624 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 TRMT6Q9UJA5 497 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 NCKAP1Q9Y2A7 1128 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 SPATA31A3Q5VYP0 1347 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 KRT4P19013 534 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 EFNA5P52803 228 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 NPEPPSP55786 919 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 KLHL38Q2WGJ6 581 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 MTSS1LQ765P7 747 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 SNF8Q96H20 258 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 CEP41Q9BYV8 373 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 PALMDQ9NP74 551 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 NUDT5Q9UKK9 219 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 GPSM3Q9Y4H4 160 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 LUC7L3O95232 432 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 GRK2P25098 689 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 GSTA3Q16772 222 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ZNF284Q2VY69 593 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 PLD3Q8IV08 490 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 SEMA4DQ92854 862 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 REEP2Q9BRK0 252 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 GOLGA4Q13439 2230 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 TRDMT1O14717 391 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ARHGEF9O43307 516 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 GUCY2CP25092 1073 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 GPR1P46091 355 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 SOX10P56693 466 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 PRKAA1Q13131 559 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 CEP78Q5JTW2 689 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 GJC2Q5T442 439 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 CES5AQ6NT32 575 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ADCK1Q86TW2 530 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 NAT16Q8N8M0 369 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 PAWRQ96IZ0 340 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 MTMR12Q9C0I1 747 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 SH3GLB2Q9NR46 395 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ARHGEF3Q9NR81 526 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ADARB2Q9NS39 739 aaKnown RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 ABHD10Q9NUJ1 306 aa8.75□□□□□ -1.01
SCN9A-203ENST00000409672 IFRD1O00458 451 aaPredicted RBP8.75□□□□□ -1.01
SCN9A-203ENST00000409672 FOXN1O15353 648 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms