RNA–Protein interactions for RNA: ENST00000409406.1

RBM4-205, Transcript of RNA binding motif protein 4, human

APPRIS P1 TSL 2 BASIC

Gene RBM4, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-205	ENST00000409406	CDR2	Q01850	454 aa		13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	CUL1	Q13616	776 aa		13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	SLC5A9	Q2M3M2	681 aa		13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	JADE1	Q6IE81	842 aa		13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	CATSPER4	Q7RTX7	472 aa		13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	KLHL7	Q8IXQ5	586 aa		13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	UBR7	Q8N806	425 aa		13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	C1orf127	Q8N9H9	656 aa		13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	CXCL16	Q9H2A7	254 aa		13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	CNOT10	Q9H9A5	744 aa	Known RBP	13.62	□□□□□ -0.23
RBM4-205	ENST00000409406	GTF2IRD1	Q9UHL9	959 aa		13.62	□□□□□ -0.23
RBM4-205	ENST00000409406		A0A0A6YYK5	440 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	TMEM253	P0C7T8	217 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	NEFH	P12036	1026 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	NQO1	P15559	274 aa	Known RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	ABCB4	P21439	1286 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	VEGFB	P49765	207 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	SGSM1	Q2NKQ1	1148 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	LRRC57	Q8N9N7	239 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	ARHGEF26	Q96DR7	871 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	FAM210A	Q96ND0	272 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	EIF2A	Q9BY44	585 aa	Known RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	THAP2	Q9H0W7	228 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	ASB7	Q9H672	318 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	XPNPEP3	Q9NQH7	507 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	IRAK4	Q9NWZ3	460 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	THSD7B	Q9C0I4	1608 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	ANKRD62	A6NC57	917 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	LUC7L3	O95232	432 aa	Known RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	TNNC2	P02585	160 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	FTL	P02792	175 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	GNAT1	P11488	350 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	GZMA	P12544	262 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	CCND1	P24385	295 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	TBXAS1	P24557	533 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	GRM5	P41594	1212 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	ABL2	P42684	1182 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	PDE6C	P51160	858 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	HTRA3	P83110	453 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	MTMR3	Q13615	1198 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	PDCD2	Q16342	344 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	KYAT1	Q16773	422 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	FAM133B	Q5BKY9	247 aa	Known RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	MAP3K21	Q5TCX8	1036 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	GDF6	Q6KF10	455 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	SLC30A9	Q6PML9	568 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	KLHDC9	Q8NEP7	349 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	MDM1	Q8TC05	714 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	CENPT	Q96BT3	561 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	ANKRD36BP1	Q96IX9	119 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	ADPGK	Q9BRR6	497 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	NEUROG2	Q9H2A3	272 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	GOLPH3	Q9H4A6	298 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	OSGEP	Q9NPF4	335 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	ZFAT	Q9P243	1243 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	AGAP1	Q9UPQ3	857 aa		13.61	□□□□□ -0.23
RBM4-205	ENST00000409406	SCN1A	P35498	2009 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	MROH7	Q68CQ1	1323 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	RALGAPA2	Q2PPJ7	1873 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	NPTXR	O95502	500 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	FTCD	O95954	541 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	RNASE9	P60153	205 aa	Known RBP	13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	KCNJ2	P63252	427 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.6	□□□□□ -0.23	1e-16	■■□□□ 13.4
RBM4-205	ENST00000409406	CWF19L1	Q69YN2	538 aa	Known RBP	13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	SLC27A1	Q6PCB7	646 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	TMEM270	Q6UE05	265 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	MFN1	Q8IWA4	741 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	NME8	Q8N427	588 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	USP38	Q8NB14	1042 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	TPCN2	Q8NHX9	752 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	WNT8B	Q93098	351 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	ACAP3	Q96P50	834 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	IMPG2	Q9BZV3	1241 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	SPC25	Q9HBM1	224 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	HES2	Q9Y543	173 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	PCDHB2	Q9Y5E7	798 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	NCAN	O14594	1321 aa		13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	PDCD11	Q14690	1871 aa	Known RBP	13.6	□□□□□ -0.23
RBM4-205	ENST00000409406	ASGR1	P07306	291 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	CRYBB1	P53674	252 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	TRPC3	Q13507	836 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	KCNA10	Q16322	511 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	IFI16	Q16666	785 aa	Known RBP	13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	DCAF4L1	Q3SXM0	396 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	KRT71	Q3SY84	523 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	PIGW	Q7Z7B1	504 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	SLC35G2	Q8TBE7	412 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	TLCD1	Q96CP7	247 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	NIF3L1	Q9GZT8	377 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	COG5	Q9UP83	839 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	PCDHB4	Q9Y5E5	795 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	ASPA	P45381	313 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	ZNF132	P52740	706 aa		13.59	□□□□□ -0.23
RBM4-205	ENST00000409406	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.59	□□□□□ -0.23	5e-7	■□□□□ 9.9

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms