RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 PLEKHA7Q6IQ23 1121 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 DENND1BQ6P3S1 775 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 DNAJC24Q6P3W2 148 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 NOTUMQ6P988 496 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 SLC27A1Q6PCB7 646 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 CCDC50Q8IVM0 306 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 PRELID2Q8N945 189 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 C18orf8Q96DM3 657 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 HEXIM2Q96MH2 286 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 APBA2Q99767 749 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 PLVAPQ9BX97 442 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 HEMGNQ9BXL5 484 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 BCO2Q9BYV7 579 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 HMGXB4Q9UGU5 601 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 MTUS1Q9ULD2 1270 aa4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 PIN4Q9Y237 131 aaKnown RBP4.22□□□□□ -1.73
LRRTM4-201ENST00000409088 C17orf102A2RUQ5 167 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 MBLAC1A4D2B0 266 aaPredicted RBP4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 AGPSO00116 658 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 PHF2O75151 1096 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 LSM8O95777 96 aaKnown RBP4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 SYF2O95926 243 aaKnown RBP4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 CALB1P05937 261 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 RARAP10276 462 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 AKR1A1P14550 325 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 HSPA6P17066 643 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 PSMC4P43686 418 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 YARSP54577 528 aaKnown RBP4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 TAS2R40P59535 323 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 PTPN11Q06124 597 aaPredicted RBP4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 SREBF2Q12772 1141 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 CUL1Q13616 776 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 DCAF4L1Q3SXM0 396 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 ATP13A4Q4VNC1 1196 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 PPP1R2P3Q6NXS1 205 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 CCDC137Q6PK04 289 aaKnown RBP4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 CCDC105Q8IYK2 499 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 C7orf31Q8N865 590 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 SLC4A11Q8NBS3 891 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 CXorf38Q8TB03 319 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 TMEM40Q8WWA1 233 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 C1orf54Q8WWF1 131 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 SOCS4Q8WXH5 440 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 CAVIN3Q969G5 261 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 TMEM176AQ96HP8 235 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 ZMAT2Q96NC0 199 aaKnown RBP4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 MCEEQ96PE7 176 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 RUFY1Q96T51 708 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNF518BQ9C0D4 1074 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 ARHGAP39Q9C0H5 1083 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 ELOVL4Q9GZR5 314 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 NEUROG2Q9H2A3 272 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 NXF3Q9H4D5 531 aaKnown RBP4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 KLK14Q9P0G3 267 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 TJP2Q9UDY2 1190 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 PTPN22Q9Y2R2 807 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 C2CD2Q9Y426 696 aa4.21□□□□□ -1.73
LRRTM4-201ENST00000409088 MYADML2A6NDP7 307 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 FAM155AB1AL88 458 aaPredicted RBP4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 HAS3O00219 553 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 PPEF2O14830 753 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 MED7O43513 233 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 HSF2BPO75031 334 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 RNF40O75150 1001 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 CILPO75339 1184 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 RECQL4O94761 1208 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 PGK1P00558 417 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 CHRNA3P32297 505 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 ADAM17P78536 824 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 SNX1Q13596 522 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 SNX17Q15036 470 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 PTPN20Q4JDL3 420 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 CFAP58Q5T655 872 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 TTC27Q6P3X3 843 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 APBB1IPQ7Z5R6 666 aaPredicted RBP4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 SESTD1Q86VW0 696 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 JAMLQ86YT9 394 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 RHOT1Q8IXI2 618 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 GOLGA6L1Q8N7Z2 621 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 UBA3Q8TBC4 463 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 FAM71BQ8TC56 605 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 WHAMMQ8TF30 809 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 C18orf25Q96B23 403 aaPredicted RBP4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 ERP44Q9BS26 406 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 RAB17Q9H0T7 212 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 SYNCQ9H7C4 482 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 MED4Q9NPJ6 270 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 PARP2Q9UGN5 583 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 IP6K2Q9UHH9 426 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 ADAM21Q9UKJ8 722 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 ITGA11Q9UKX5 1188 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 GABRQQ9UN88 632 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 SNX24Q9Y343 169 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 SNX9Q9Y5X1 595 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 DNAH12Q6ZR08 3092 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 TMEM191CA6NGB0 347 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 F8VP50 259 aa4.21□□□□□ -1.74
LRRTM4-201ENST00000409088 PI4K2BG5E9Z4 385 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms