RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 KHDC1Q4VXA5 237 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 KRT27Q7Z3Y8 459 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 PTAR1Q7Z6K3 402 aaPredicted RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 LMO3Q8TAP4 145 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 FEZF2Q8TBJ5 459 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 ZNF606Q8WXB4 792 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 PYDC1Q8WXC3 89 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 DNAJC9Q8WXX5 260 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 ZNF75CPQ92670 426 aaPredicted RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 GBP5Q96PP8 586 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 TRIM55Q9BYV6 548 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 SEL1LQ9UBV2 794 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 STRCP1A6NGW2 1772 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 DPPA5A6NC42 116 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 KBTBD13C9JR72 458 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 MGRN1O60291 552 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 RNF8O76064 485 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 PDGFRBP09619 1106 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 KRT3P12035 628 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 KCNA3P22001 575 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 KCNA4P22459 653 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 CAP2P40123 477 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 CLCN3P51790 818 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 RPL10AP62906 217 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 PDE1BQ01064 536 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 UBAP2LQ14157 1087 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 CHI3L2Q15782 390 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 KBTBD12Q3ZCT8 623 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 TCHHL1Q5QJ38 904 aaPredicted RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 CGB2Q6NT52 195 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 GADL1Q6ZQY3 521 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 YTHDF3Q7Z739 585 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 NLGN1Q8N2Q7 840 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 TMEM161BQ8NDZ6 487 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 SHKBP1Q8TBC3 707 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 SHC3Q92529 594 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 FAM163AQ96GL9 167 aaPredicted RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 SERPINB12Q96P63 405 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 DENND2DQ9H6A0 471 aaPredicted RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 ATP6V0A4Q9HBG4 840 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 MRPL47Q9HD33 250 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 MAN1C1Q9NR34 630 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.74□□□□□ -1.01
SNX13-201ENST00000409076 SPATS2LQ9NUQ6 558 aaKnown RBP8.74□□□□□ -1.01
SNX13-201ENST00000409076 UVRAGQ9P2Y5 699 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 KCNG1Q9UIX4 513 aa8.74□□□□□ -1.01
SNX13-201ENST00000409076 MCF2LO15068 1137 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 CIB2O75838 187 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 PROSCO94903 275 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ZBTB7AO95365 584 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 MMP14P50281 582 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 NR1H3Q13133 447 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 CUL2Q13617 745 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ITIH4Q14624 930 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 EMC2Q15006 297 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 NBPF12Q5TAG4 269 aaPredicted RBP8.73□□□□□ -1.01
SNX13-201ENST00000409076 PIGWQ7Z7B1 504 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ZNF354CQ86Y25 554 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 SNX31Q8N9S9 440 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ASAP3Q8TDY4 903 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 PTPRN2Q92932 1015 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 FAM136AQ96C01 138 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 BORCS6Q96GS4 357 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 MARK4Q96L34 752 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 PICK1Q9NRD5 415 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 PCYOX1Q9UHG3 505 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 PCDHB2Q9Y5E7 798 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 CFAP73A6NFT4 308 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 B4GALT5O43286 388 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 VIL1P09327 827 aaKnown RBP8.73□□□□□ -1.01
SNX13-201ENST00000409076 FDX1P10109 184 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ATP6V1B1P15313 513 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 GLRA2P23416 452 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ADORA2BP29275 332 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ARL4CP56559 192 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 EN1Q05925 392 aaPredicted RBP8.73□□□□□ -1.01
SNX13-201ENST00000409076 MAMLD1Q13495 774 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 OLIG2Q13516 323 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 PGM5Q15124 567 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ZNF568Q3ZCX4 644 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 STRIP1Q5VSL9 837 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 DENND1BQ6P3S1 775 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 SDCCAG8Q86SQ7 713 aaPredicted RBP8.73□□□□□ -1.01
SNX13-201ENST00000409076 NIM1KQ8IY84 436 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 NDRG1Q92597 394 aaKnown RBP8.73□□□□□ -1.01
SNX13-201ENST00000409076 CPB2Q96IY4 423 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ADPGKQ9BRR6 497 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 TRIM4Q9C037 500 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 FAM49AQ9H0Q0 323 aaPredicted RBP8.73□□□□□ -1.01
SNX13-201ENST00000409076 MANSC1Q9H8J5 431 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 JPH1Q9HDC5 661 aaPredicted RBP8.73□□□□□ -1.01
SNX13-201ENST00000409076 TXNDC16Q9P2K2 825 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 TSR3Q9UJK0 312 aaKnown RBP8.73□□□□□ -1.01
SNX13-201ENST00000409076 ZNF536O15090 1300 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ZBED1O96006 694 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 CCND1P24385 295 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 ACTR2P61160 394 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 OGDHQ02218 1023 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 C6orf163Q5TEZ5 329 aa8.73□□□□□ -1.01
SNX13-201ENST00000409076 SLC39A4Q6P5W5 647 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms