RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SERTAD1Q9UHV2 236 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 FBXO4Q9UKT5 387 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 CDH9Q9ULB4 789 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 MIA3Q5JRA6 1907 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 FAM170BA6NMN3 283 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 HEPACAM2A8MVW5 462 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 PDXKO00764 312 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 GABRDO14764 452 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 LAMTOR5O43504 91 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 PI15O43692 258 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 ACTN4O43707 911 aaKnown RBP9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 CALUO43852 315 aaPredicted RBP9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 PHACTR2O75167 634 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 MOSPD3O75425 235 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 P4HA1P13674 534 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 ATF6P18850 670 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 WARSP23381 471 aaKnown RBP9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 ANXA13P27216 316 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 AVPR1AP37288 418 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 MAGEA11P43364 429 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 RPS9P46781 194 aaKnown RBP9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 AMPD2Q01433 879 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 FCHO2Q0JRZ9 810 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 PKP1Q13835 747 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 LRRC32Q14392 662 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 GRM2Q14416 872 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 ZNF528Q3MIS6 628 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 VSTM1Q6UX27 236 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 VITQ6UXI7 678 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 TRAPPC11Q7Z392 1133 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 SLC9A9Q8IVB4 645 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 ARID3BQ8IVW6 561 aaPredicted RBP9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 C1orf210Q8IVY1 113 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 TMEM130Q8N3G9 435 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 FSIP1Q8NA03 581 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 GLIS3Q8NEA6 775 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 TMEM174Q8WUU8 243 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 HPS3Q969F9 1004 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 CCDC127Q96BQ5 260 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 PAGE5Q96GU1 130 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 MMS19Q96T76 1030 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 SYT15Q9BQS2 421 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 GTPBP4Q9BZE4 634 aaKnown RBP9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 FOXQ1Q9C009 403 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 SNX25Q9H3E2 840 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 ZNF334Q9HCZ1 680 aaPredicted RBP9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 FAM86C1Q9NVL1 165 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 SPATA6Q9NWH7 488 aaPredicted RBP9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 SIX4Q9UIU6 781 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 PIAS3Q9Y6X2 628 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 ATP8B3O60423 1300 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 WDFY4Q6ZS81 3184 aa9.73□□□□□ -0.85
SNORD88A-201ENST00000408314 NUP210Q8TEM1 1887 aaPredicted RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 FAM237AA0A1B0GTK4 181 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 A0A1B0GVL5 298 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 GOLGA6L4A6NEF3 574 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 TRIM66O15016 1216 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 CLIC2O15247 247 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 TGFB1I1O43294 461 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 TACC1O75410 805 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 RPN1P04843 607 aaKnown RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 DCNP07585 359 aaKnown RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 GJA1P17302 382 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 PFKLP17858 780 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 RPL13P26373 211 aaKnown RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 HOXD13P35453 343 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 WNT7BP56706 349 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 NUCB2P80303 420 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 BIRC3Q13489 604 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 KMT5BQ4FZB7 885 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 CC2D1AQ6P1N0 951 aaPredicted RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 GAREM2Q75VX8 874 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 LRRTM3Q86VH5 581 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 TTC9BQ8N6N2 239 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 CELF5Q8N6W0 485 aaKnown RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 RDH13Q8NBN7 331 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 ZSWIM2Q8NEG5 633 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 ST13P5Q8NFI4 369 aaPredicted RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 OR5B17Q8NGF7 314 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 CXorf38Q8TB03 319 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 BPIFB1Q8TDL5 484 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 FAM3CQ92520 227 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 TRMT2BQ96GJ1 504 aaKnown RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 ZSWIM3Q96MP5 696 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 LPIN3Q9BQK8 851 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 PI4K2AQ9BTU6 479 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 FAM126AQ9BYI3 521 aaPredicted RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 PLA2G2FQ9BZM2 168 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 HEBP1Q9NRV9 189 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 DLGAP2Q9P1A6 1054 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 MAGEC2Q9UBF1 373 aaPredicted RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 HOOK1Q9UJC3 728 aaKnown RBP9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 HPSEQ9Y251 543 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 FRMD4BQ9Y2L6 1034 aa9.72□□□□□ -0.85
SNORD88A-201ENST00000408314 PRR23AA6NEV1 266 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 MAPK13O15264 365 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 KLRC4O43908 158 aa9.71□□□□□ -0.86
SNORD88A-201ENST00000408314 SOAT2O75908 522 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms