RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 POLIQ9UNA4 740 aa10.39□□□□□ -0.75
MSH2-202ENST00000406134 E7ESA3 106 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 IGF2BP3O00425 579 aaKnown RBP eCLIP10.38□□□□□ -0.75
MSH2-202ENST00000406134 DKC1O60832 514 aaKnown RBP eCLIP10.38□□□□□ -0.753e-14■■■■■ 64.4
MSH2-202ENST00000406134 TMEM63AO94886 807 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 LSM8O95777 96 aaKnown RBP10.38□□□□□ -0.75
MSH2-202ENST00000406134 KRT1P04264 644 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 GJB1P08034 283 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 RPS12P25398 132 aaKnown RBP10.38□□□□□ -0.75
MSH2-202ENST00000406134 RFC1P35251 1148 aaPredicted RBP10.38□□□□□ -0.75
MSH2-202ENST00000406134 COPS2P61201 443 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 CCDC15Q0P6D6 951 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 STRN3Q13033 797 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 TFDP3Q5H9I0 405 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 LIN9Q5TKA1 542 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 SLFN12LQ6IEE8 588 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 GPAT2Q6NUI2 795 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 SH2D5Q6ZV89 423 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 CEP120Q8N960 986 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 AGAP11Q8TF27 550 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 PRPF31Q8WWY3 499 aaKnown RBP10.38□□□□□ -0.75
MSH2-202ENST00000406134 CDHR1Q96JP9 859 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 ARL2BPQ9Y2Y0 163 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 PLXNB2O15031 1838 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 POTEJP0CG39 1038 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 RAP1GAPP47736 663 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 GPS1Q13098 491 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 MORF4L2Q15014 288 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 ZNF394Q53GI3 561 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 SH3D19Q5HYK7 790 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 EFHC2Q5JST6 749 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 NOL9Q5SY16 702 aaKnown RBP10.38□□□□□ -0.75
MSH2-202ENST00000406134 ZPBP2Q6X784 338 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 IGDCC3Q8IVU1 814 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 DNERQ8NFT8 737 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 PEBP4Q96S96 227 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 NCAPGQ9BPX3 1015 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 FAM47DPA6NHR8 397 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 RASA4BC9J798 803 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 RASA4O43374 803 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 CNMDO75829 334 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 LDHAP00338 332 aaKnown RBP10.38□□□□□ -0.75
MSH2-202ENST00000406134 WEE2P0C1S8 567 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 ABCD1P33897 745 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 CDR1P51861 262 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 RASA2Q15283 850 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 CTC1Q2NKJ3 1217 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 RIBC1Q8N443 379 aaPredicted RBP10.38□□□□□ -0.75
MSH2-202ENST00000406134 CCDC63Q8NA47 563 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 DEPTORQ8TB45 409 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 C10orf82Q8WW14 230 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 CNKSR2Q8WXI2 1034 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 CPXM1Q96SM3 734 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 BCO2Q9BYV7 579 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 MYLK2Q9H1R3 596 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 MINDY3Q9H8M7 445 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 KCNK9Q9NPC2 374 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 L3MBTL1Q9Y468 752 aa10.38□□□□□ -0.75
MSH2-202ENST00000406134 B4GALT5O43286 388 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 ERBB2P04626 1255 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 ATF7P17544 494 aaPredicted RBP10.37□□□□□ -0.75
MSH2-202ENST00000406134 SMTNL2Q2TAL5 461 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 ZNF365Q70YC5 407 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 ZBTB33Q86T24 672 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 TRIM50Q86XT4 487 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 STAMBPL1Q96FJ0 436 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 RBM41Q96IZ5 413 aaKnown RBP10.37□□□□□ -0.75
MSH2-202ENST00000406134 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 C12orf65Q9H3J6 166 aaKnown RBP10.37□□□□□ -0.75
MSH2-202ENST00000406134 PCDH9Q9HC56 1237 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 SNCAIPQ9Y6H5 919 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 CFAP73A6NFT4 308 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 GM2AP17900 193 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 CYP3A5P20815 502 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 ATP5DP30049 168 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 LY6KQ17RY6 165 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 KCNT1Q5JUK3 1230 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 ANGEL2Q5VTE6 544 aaKnown RBP10.37□□□□□ -0.75
MSH2-202ENST00000406134 XYLT1Q86Y38 959 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 DCAKDQ8WVC6 231 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 TCP11Q8WWU5 503 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 FOXP3Q9BZS1 431 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 NIF3L1Q9GZT8 377 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 NSRP1Q9H0G5 558 aaKnown RBP10.37□□□□□ -0.75
MSH2-202ENST00000406134 STARD13Q9Y3M8 1113 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 KAT6AQ92794 2004 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 HARSP12081 509 aaKnown RBP10.37□□□□□ -0.75
MSH2-202ENST00000406134 EIF4BP23588 611 aaKnown RBP10.37□□□□□ -0.75
MSH2-202ENST00000406134 RFC5P40937 340 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 RAD23BP54727 409 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 DNAJC3Q13217 504 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 STXBP2Q15833 593 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 PDK4Q16654 411 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 MAPK6Q16659 721 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 LBX2Q6XYB7 198 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 POLNQ7Z5Q5 900 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 C4orf33Q8N1A6 199 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 BBOF1Q8ND07 529 aa10.37□□□□□ -0.75
MSH2-202ENST00000406134 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.37□□□□□ -0.75
MSH2-202ENST00000406134 SLC7A6OSQ96CW6 309 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms